RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PEPDP12955 493 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 TIA1P31483 386 aaKnown RBP eCLIP10.36□□□□□ -0.75
PALB2-206ENST00000568219 PYCR1P32322 319 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 PCGF2P35227 344 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 SSR2P43308 183 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 GPR4P46093 362 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 STK19P49842 368 aaPredicted RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 CSRP3P50461 194 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 GPR176Q14439 515 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 GPR33Q49SQ1 333 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 MANEALQ5VSG8 457 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 MEDAGQ5VYS4 303 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 LYPD4Q6UWN0 246 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 COMMD6Q7Z4G1 85 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 ANKK1Q8NFD2 765 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 RHBGQ9H310 441 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 ERVMER34-1Q9H9K5 563 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 PCDHB16Q9NRJ7 776 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 PLCXD1Q9NUJ7 323 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 COPZ2Q9P299 210 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 COPS3Q9UNS2 423 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 TEX51A0A1B0GUA7 166 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 ADAP00813 363 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 FGBP02675 491 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 ATP1B2P14415 290 aaPredicted RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 RPL3P39023 403 aaKnown RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 ERVK-25P63136 954 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 DSG2Q14126 1118 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 SLC36A4Q6YBV0 504 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 TEX26Q8N6G2 289 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 GPR26Q8NDV2 337 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 DBF4BQ8NFT6 615 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 OR5D16Q8NGK9 328 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 ST8SIA4Q92187 359 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 RBPMSQ93062 196 aaKnown RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 UPRTQ96BW1 309 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 CLSTN3Q9BQT9 956 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 TMEM5Q9Y2B1 443 aa10.36□□□□□ -0.75
PALB2-206ENST00000568219 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
PALB2-206ENST00000568219 KIAA1217Q5T5P2 1943 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 SCAMP1O15126 338 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 PLA2G10O15496 165 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 RGS11O94810 467 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 HBQ1P09105 142 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SOX18P35713 384 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 ZNF792Q3KQV3 632 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SPIN4Q56A73 249 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 LRRN1Q6UXK5 716 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 RTL4Q6ZR62 310 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 CALHM3Q86XJ0 350 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 VRK3Q8IV63 474 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 OR52N2Q8NGI0 321 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SPRYD4Q8WW59 207 aaPredicted RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 PDLIM5Q96HC4 596 aaKnown RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 ZCCHC2Q9C0B9 1178 aaKnown RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 RC3H2Q9HBD1 1191 aaKnown RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 ADARB2Q9NS39 739 aaKnown RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 PLCL2Q9UPR0 1127 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SIX6O95475 246 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 CSN2P05814 226 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 TRAPPC2P0DI81 140 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 TRAPPC2BP0DI82 140 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 AOAHP28039 575 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 HLA-DMAP28067 261 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 PITPNBP48739 271 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 AP1S1P61966 158 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 ODF4Q2M2E3 257 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 TEX261Q6UWH6 196 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 BHLHA9Q7RTU4 235 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 FAM124AQ86V42 546 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SLITRK4Q8IW52 837 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 PIGXQ8TBF5 258 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 TRMT10AQ8TBZ6 339 aaKnown RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 FAM46AQ96IP4 442 aaKnown RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 C7orf34Q96L11 122 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 PITX2Q99697 317 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 CDCA4Q9BXL8 241 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 MED11Q9P086 117 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 MARK1Q9P0L2 795 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 U3KQ87 197 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 V9GYH0 126 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 LOC100509620A0A075B734 347 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 ARPC4-TTLL3A0A0A6YYG9 625 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SLC38A8A6NNN8 435 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 HRO43593 1189 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 SLC43A1O75387 559 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 S100A6P06703 90 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 WDR5P61964 334 aaKnown RBP10.35□□□□□ -0.75
PALB2-206ENST00000568219 C4orf46Q504U0 113 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 FCRLBQ6BAA4 426 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 C3P1Q6ZMU1 363 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 ESPNLQ6ZVH7 1005 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 PRSS45Q7RTY3 260 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 C6orf120Q7Z4R8 191 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 ZNF527Q8NB42 609 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 OR52I1Q8NGK6 324 aa10.35□□□□□ -0.75
PALB2-206ENST00000568219 WDR48Q8TAF3 677 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms