RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 WLSQ5T9L3 541 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 SLC29A4Q7RTT9 530 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 WDR75Q8IWA0 830 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 CENPLQ8N0S6 344 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 CLYBLQ8N0X4 340 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 FBXW8Q8N3Y1 598 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 RNF175Q8N4F7 328 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 CHAC2Q8WUX2 184 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 KCTD4Q8WVF5 259 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 REPS1Q96D71 796 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 GAL3ST4Q96RP7 486 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 MDFIQ99750 246 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ZNF559Q9BR84 538 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 CNPPD1Q9BV87 410 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ZNF717Q9BY31 904 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 RAB17Q9H0T7 212 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 EXO5Q9H790 373 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ZNF703Q9H7S9 590 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 ACTR8Q9H981 624 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ZFP64Q9NPA5 681 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 BRD7Q9NPI1 651 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 LYARQ9NX58 379 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 CNIH4Q9P003 139 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 Q9UFV3 132 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 BOKQ9UMX3 212 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 CHCHD2Q9Y6H1 151 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 NINQ8N4C6 2090 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 SETD2Q9BYW2 2564 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 A0A0A6YYD5 115 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 TRGV5A0A0B4J1U4 118 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 FAM47E-STBD1D6RA91 191 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 TMPRSS11DO60235 418 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 OR10H2O60403 315 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 UGDHO60701 494 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 EEDO75530 441 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 C2P06681 752 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 RFPL3SP0C7P2 107 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 NR2F6P10588 404 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 GFAPP14136 432 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 GABRA1P14867 456 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ENDOUP21128 410 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 SERPINB3P29508 390 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 BSGP35613 385 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ALDH18A1P54886 795 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 SLC37A1P57057 533 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 RPS13P62277 151 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 HERVK_113P63132 956 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ERVK-8P63133 956 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 IRF9Q00978 393 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 GUCY2DQ02846 1103 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 MYBPHQ13203 477 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 CUL3Q13618 768 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ZNF267Q14586 743 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 ACAP2Q15057 778 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 TRADDQ15628 312 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 CPSF6Q16630 551 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDH13-210ENST00000567445 PFKFB4Q16877 469 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 SPRED3Q2MJR0 410 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 C1orf185Q5T7R7 199 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 MROH9Q5TGP6 573 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 PRAMEF20Q5VT98 475 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 CES4AQ5XG92 561 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 MRM1Q6IN84 353 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 CYP20A1Q6UW02 462 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ZDHHC24Q6UX98 284 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 RNF111Q6ZNA4 994 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 LRRC25Q8N386 305 aaPredicted RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 FAM13CQ8NE31 585 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 MYRIPQ8NFW9 859 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 OR10G3Q8NGC4 313 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ANP32BQ92688 251 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 RIT1Q92963 219 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ERVK-6Q9BXR3 956 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 WWTR1Q9GZV5 400 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 DDX31Q9H8H2 851 aaKnown RBP8.45□□□□□ -1.06
CDH13-210ENST00000567445 IPPKQ9H8X2 491 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 WDR41Q9HAD4 459 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 PROK2Q9HC23 129 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 QPCTLQ9NXS2 382 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 PSD3Q9NYI0 1048 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 SPRR3Q9UBC9 169 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ERVK-19Q9WJR5 959 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ASB4Q9Y574 426 aa8.45□□□□□ -1.06
CDH13-210ENST00000567445 ZFHX3Q15911 3703 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 AKAP6Q13023 2319 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 ANKHD1Q8IWZ3 2542 aaKnown RBP8.44□□□□□ -1.06
CDH13-210ENST00000567445 A0A1W2PR48 441 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 HMX2A2RU54 273 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 LRRC14BA6NHZ5 514 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 LRRC3CA6NJW4 275 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 GLOD5A6NK44 160 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 OR6C76A6NM76 312 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 WASHC1A8K0Z3 465 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 FOXE1O00358 373 aaPredicted RBP8.44□□□□□ -1.06
CDH13-210ENST00000567445 KLHL2O95198 593 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 FAM58BPP0C7Q3 252 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 SLC35E2P0CK97 266 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 GALNSP34059 522 aa8.44□□□□□ -1.06
CDH13-210ENST00000567445 ADH7P40394 386 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms