RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CRABP2P29373 138 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 CDKN1AP38936 164 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 BDKRB1P46663 353 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 KCNJ5P48544 419 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 CLCN7P51798 805 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 DSCR9P59020 149 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 SLC18A2Q05940 514 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ILF2Q12905 390 aaKnown RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 FOXF2Q12947 444 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 CSHL1Q14406 222 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ACSBG2Q5FVE4 666 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ZNF425Q6IV72 752 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 TMEM214Q6NUQ4 689 aaKnown RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 PAQR3Q6TCH7 311 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 TREML4Q6UXN2 200 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 DNM1P46Q6ZS02 220 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 TBC1D1Q86TI0 1168 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 VRK3Q8IV63 474 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 CENPLQ8N0S6 344 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 LRRC25Q8N386 305 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 SPATA6LQ8N4H0 392 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ANKRD42Q8N9B4 389 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 FBXO15Q8NCQ5 510 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ACMSDQ8TDX5 336 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 KCTD4Q8WVF5 259 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 NCLNQ969V3 563 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 INTS12Q96CB8 462 aaKnown RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 SCYL1Q96KG9 808 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 MARK4Q96L34 752 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 PANX3Q96QZ0 392 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 SYNPO2LQ9H987 977 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 KCNK9Q9NPC2 374 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 MYOTQ9UBF9 498 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 LIPT1Q9Y234 373 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ACOT9Q9Y305 439 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 KMT2CQ8NEZ4 4911 aaKnown RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 MED12LQ86YW9 2145 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 A0A0A6YYJ9 748 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 TMEM120BA0PK00 339 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 ZNF839A8K0R7 811 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 SLCO1B7G3V0H7 640 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 C16orf97H3BN30 126 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 WWP2O00308 870 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 SSX4O60224 188 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 GLRA3O75311 464 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 RCBTB2O95199 551 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 C1orf105O95561 183 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 CCDC166P0CW27 439 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 IGHV4-31P0DP07 118 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 CCL3P10147 92 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 POU2F1P14859 743 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 SLC25A16P16260 332 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 LOXP28300 417 aaPredicted RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 CCR7P32248 378 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 GCKP35557 465 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 UGT2B10P36537 528 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 SRP14P37108 136 aaKnown RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 PIGAP37287 484 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 NUDT6P53370 316 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 RPS15AP62244 130 aaKnown RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 ABATP80404 500 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 PRDX1Q06830 199 aaKnown RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 DLG1Q12959 904 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 HERC3Q15034 1050 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 NRF1Q16656 503 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 XKR6Q5GH73 641 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 ICE2Q659A1 982 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 VASNQ6EMK4 673 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 UGT3A1Q6NUS8 523 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 NIPAL1Q6NVV3 410 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 ZNF550Q7Z398 422 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 PLD3Q8IV08 490 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 BANPQ8N9N5 519 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 MGARPQ8TDB4 240 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 ANKRD49Q8WVL7 239 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 AKAP1Q92667 903 aaKnown RBP eCLIP8.83□□□□□ -1
CAPN3-216ENST00000567071 EXT2Q93063 718 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 FBXW5Q969U6 566 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 NXNL1Q96CM4 212 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 LINGO1Q96FE5 620 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 JSRP1Q96MG2 331 aaPredicted RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 TSNARE1Q96NA8 513 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 IQCGQ9H095 443 aaKnown RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 ALG2Q9H553 416 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 LIN28AQ9H9Z2 209 aaKnown RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 POPDC3Q9HBV1 291 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 SEMA4BQ9NPR2 832 aaPredicted RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 PRDM9Q9NQV7 894 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 TAC3Q9UHF0 121 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 RUVBL2Q9Y230 463 aaKnown RBP8.83□□□□□ -1
CAPN3-216ENST00000567071 DHRS7Q9Y394 339 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 ACTL7BQ9Y614 415 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 NINQ8N4C6 2090 aa8.83□□□□□ -1
CAPN3-216ENST00000567071 IGKV1-8A0A0C4DH67 115 aa8.82□□□□□ -1
CAPN3-216ENST00000567071 LOC100289279A0A1B0GTE1 492 aa8.82□□□□□ -1
CAPN3-216ENST00000567071 A0A1W2PP18 115 aa8.82□□□□□ -1
CAPN3-216ENST00000567071 NPEPPSL1A6NEC2 478 aa8.82□□□□□ -1
CAPN3-216ENST00000567071 FAM157AC9JC47 383 aa8.82□□□□□ -1
CAPN3-216ENST00000567071 TMPRSS2O15393 492 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms