RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 DMRT3Q9NQL9 472 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 TMEM161AQ9NX61 479 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 GLTPQ9NZD2 209 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 MALT1Q9UDY8 824 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 EXOSC1Q9Y3B2 195 aaKnown RBP14.85□□□□□ -0.03
COMMD4-215ENST00000566843 IFI30P13284 250 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 KCNJ5P48544 419 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 GIPRP48546 466 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 PER3P56645 1201 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 TAS2R50P59544 299 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 SMAD3P84022 425 aaKnown RBP14.85□□□□□ -0.03
COMMD4-215ENST00000566843 NFE2L1Q14494 772 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 NDUFA9Q16795 377 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 ACSM5Q6NUN0 579 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 Q6ZNB5 142 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 LRRC56Q8IYG6 542 aaPredicted RBP14.85□□□□□ -0.03
COMMD4-215ENST00000566843 HORMAD2Q8N7B1 307 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 ARIH2OSQ8N7S6 290 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 SLC7A13Q8TCU3 470 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 ADAMTS19Q8TE59 1207 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 GATAD2BQ8WXI9 593 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 ZNF354BQ96LW1 612 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 KCNE2Q9Y6J6 123 aa14.85□□□□□ -0.03
COMMD4-215ENST00000566843 PRR23AA6NEV1 266 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 C5orf58C9J3I9 102 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 ZNF197O14709 1029 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 MTX2O75431 263 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 CATP04040 527 aaKnown RBP14.84□□□□□ -0.03
COMMD4-215ENST00000566843 CFL1P23528 166 aaKnown RBP14.84□□□□□ -0.03
COMMD4-215ENST00000566843 BDKRB1P46663 353 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 ATN1P54259 1190 aaPredicted RBP14.84□□□□□ -0.03
COMMD4-215ENST00000566843 SLC8B1Q6J4K2 584 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 MZT2AQ6P582 158 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 TMEM107Q6UX40 140 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 RBM45Q8IUH3 476 aaKnown RBP14.84□□□□□ -0.03
COMMD4-215ENST00000566843 DNAJC5GQ8N7S2 189 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 NEURL3Q96EH8 262 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 TMEM19Q96HH6 336 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 PIGUQ9H490 435 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 MVB12BQ9H7P6 319 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 SLC28A3Q9HAS3 691 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 SEMA3GQ9NS98 782 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 ADAM30Q9UKF2 790 aa14.84□□□□□ -0.03
COMMD4-215ENST00000566843 ISM1B1AKI9 464 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 SLC16A8O95907 504 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 BCHEP06276 602 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 CYP4F8P98187 520 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 MPPE1Q53F39 396 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 BICRALQ6AI39 1079 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 DEF8Q6ZN54 512 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 IKBIPQ70UQ0 350 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 TMPRSS11BQ86T26 416 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 SLC51BQ86UW2 128 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 OR8H1Q8NGG4 311 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 UCN3Q969E3 161 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 RNFT2Q96EX2 444 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 DEFB118Q96PH6 123 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 GFM1Q96RP9 751 aaKnown RBP14.83□□□□□ -0.03
COMMD4-215ENST00000566843 TAAR2Q9P1P5 351 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 FBXW2Q9UKT8 454 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 A4GNTQ9UNA3 340 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 PRELID1Q9Y255 219 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 DOCK6Q96HP0 2047 aa14.83□□□□□ -0.03
COMMD4-215ENST00000566843 A0A1W2PQ45 241 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-215ENST00000566843 A0A1W2PQY0 241 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 A0A1W2PRQ8 180 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 TMEM202A6NGA9 273 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 FABP7O15540 132 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 PRODHO43272 600 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 SH3BP5O60239 455 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 SLC19A2O60779 497 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 NME6O75414 186 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-215ENST00000566843 PDGFAP04085 211 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 LIMS3P0CW19 117 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 LIMS4P0CW20 117 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 SLC6A1P30531 599 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 SNRPD1P62314 119 aaKnown RBP14.83□□□□□ -0.04
COMMD4-215ENST00000566843 ENTPD8Q5MY95 495 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 ANKRD54Q6NXT1 300 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 PODNL1Q6PEZ8 512 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 MRGPREQ86SM8 312 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 LINC00471Q8N535 108 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 FOXJ1Q92949 421 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 NACC2Q96BF6 587 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 CHFRQ96EP1 664 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 CASD1Q96PB1 797 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 UBL7Q96S82 380 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-215ENST00000566843 SLC6A16Q9GZN6 736 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 PRM3Q9NNZ6 103 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 TAS2R7Q9NYW3 318 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 CD84Q9UIB8 345 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 MOSPD1Q9UJG1 213 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 RABL2BQ9UNT1 228 aa14.83□□□□□ -0.04
COMMD4-215ENST00000566843 CHP2O43745 196 aa14.82□□□□□ -0.04
COMMD4-215ENST00000566843 CKBP12277 381 aa14.82□□□□□ -0.04
COMMD4-215ENST00000566843 MMP11P24347 488 aa14.82□□□□□ -0.04
COMMD4-215ENST00000566843 AVPR1BP47901 424 aa14.82□□□□□ -0.04
COMMD4-215ENST00000566843 LMAN2Q12907 356 aa14.82□□□□□ -0.04
COMMD4-215ENST00000566843 ADAM15Q13444 863 aa14.82□□□□□ -0.04
COMMD4-215ENST00000566843 MINDY4Q4G0A6 757 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms