RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CHRNB1P11230 501 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 ALAS2P22557 587 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 IFNGR2P38484 337 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 PCBP4P57723 403 aaKnown RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 TRA2BP62995 288 aaKnown RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 RACK1P63244 317 aaKnown RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 GALK2Q01415 458 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 GNA13Q14344 377 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 C22orf42Q6IC83 251 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 FAM83HQ6ZRV2 1179 aaPredicted RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 Q6ZVU0 165 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 C6orf120Q7Z4R8 191 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 TBC1D19Q8N5T2 526 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 BBS10Q8TAM1 723 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 ZBED6CLQ96FA7 236 aaPredicted RBP20.44■□□□□ 0.86
SPSB3-208ENST00000566339 BCL2L10Q9HD36 194 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 ING3Q9NXR8 418 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 SEC14L3Q9UDX4 400 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 ADAM29Q9UKF5 820 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 POLHQ9Y253 713 aa20.44■□□□□ 0.86
SPSB3-208ENST00000566339 TFECO14948 347 aaPredicted RBP20.43■□□□□ 0.86
SPSB3-208ENST00000566339 TLX2O43763 284 aaPredicted RBP20.43■□□□□ 0.86
SPSB3-208ENST00000566339 PRKYO43930 277 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 SH3BP5O60239 455 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 SOX14O95416 240 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 ETV5P41161 510 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 ETV1P50549 477 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 MANFP55145 182 aaKnown RBP20.43■□□□□ 0.86
SPSB3-208ENST00000566339 CLDN20P56880 219 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 GINS1Q14691 196 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 SF3A2Q15428 464 aaKnown RBP20.43■□□□□ 0.86
SPSB3-208ENST00000566339 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.43■□□□□ 0.86
SPSB3-208ENST00000566339 ATAT1Q5SQI0 421 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 PRAMEF8Q5VWM4 474 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 PRAMEF7Q5VXH5 474 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 SLC39A11Q8N1S5 342 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 SLC7A13Q8TCU3 470 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 MED30Q96HR3 178 aa20.43■□□□□ 0.86
SPSB3-208ENST00000566339 ANKDD1BA6NHY2 528 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 WWP2O00308 870 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 CHST10O43529 356 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 SEMA7AO75326 666 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 XPAP23025 273 aaPredicted RBP20.42■□□□□ 0.86
SPSB3-208ENST00000566339 PPP2R1BP30154 601 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 CCNJQ5T5M9 372 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 DEF8Q6ZN54 512 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 CREB3L2Q70SY1 520 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 GAREM2Q75VX8 874 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 ZNF765Q7L2R6 523 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 KIAA0907Q7Z7F0 614 aaPredicted RBP20.42■□□□□ 0.86
SPSB3-208ENST00000566339 FAM129CQ86XR2 697 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 ACOT12Q8WYK0 555 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 AP2M1Q96CW1 435 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 LRR1Q96L50 414 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 PRRC1Q96M27 445 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 CAMK1GQ96NX5 476 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 ARHGAP9Q9BRR9 750 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 FNDC11Q9BVV2 318 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 ASB6Q9NWX5 421 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 TAS2R7Q9NYW3 318 aa20.42■□□□□ 0.86
SPSB3-208ENST00000566339 LTBP2Q14767 1821 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 KDM4EB2RXH2 506 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 FAM227AF5H4B4 570 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 HMGN4O00479 90 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 CASC3O15234 703 aaKnown RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 SLC19A2O60779 497 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 GBAP04062 536 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 FAM157BP0CG42 384 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 SLC2A2P11168 524 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 PDHA2P29803 388 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 FEN1P39748 380 aaKnown RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 DAB2P98082 770 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 CYP4F8P98187 520 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 ZNF805Q5CZA5 627 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 RPS26P11Q5JNZ5 115 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 PRAMEF14Q5SWL7 426 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 PRAMEF13Q5VWM6 474 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 PODNL1Q6PEZ8 512 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 TMC8Q8IU68 726 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 TM4SF18Q96CE8 201 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 ZNF558Q96NG5 402 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 SLC38A2Q96QD8 506 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 MARVELD1Q9BSK0 173 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 JAM3Q9BX67 310 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 A6NL46 340 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 ORC5O43913 435 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 HSD17B2P37059 387 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 MMP12P39900 470 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 MAPK12P53778 367 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 DSG2Q14126 1118 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 CRTC2Q53ET0 693 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 ZNF648Q5T619 568 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 KHDRBS2Q5VWX1 349 aaKnown RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 GNPDA2Q8TDQ7 276 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 C1GALT1C1Q96EU7 318 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 FYTTD1Q96QD9 318 aaKnown RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 KCNJ15Q99712 375 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 ANKRD19PQ9H560 264 aa20.41■□□□□ 0.86
SPSB3-208ENST00000566339 SIRT3Q9NTG7 399 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-208ENST00000566339 A0A0B4J293 547 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms