RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 ARFIP2P53365 341 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 POLE2P56282 527 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 SLC37A1P57057 533 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 MAP4K2Q12851 820 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 HSPB3Q12988 150 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 GAB1Q13480 694 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 RAPSNQ13702 412 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 UBAP2LQ14157 1087 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 SQLEQ14534 574 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 ZNF267Q14586 743 aaPredicted RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 EXOSC7Q15024 291 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 MLC1Q15049 377 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 EBPQ15125 230 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 DPY19L1Q2PZI1 675 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 TIGD2Q4W5G0 525 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 TRMT12Q53H54 448 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 CPTPQ5TA50 214 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 H3F3CQ6NXT2 135 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 PAOXQ6QHF9 649 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 TMEM107Q6UX40 140 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 GPR155Q7Z3F1 870 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 KBTBD2Q8IY47 623 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 CLECL1Q8IZS7 167 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 MIER2Q8N344 545 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 OR2L13Q8N349 312 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 GALNT16Q8N428 558 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 ZNF615Q8N8J6 731 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 ZNF441Q8N8Z8 693 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 C7orf57Q8NEG2 295 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 FDCSPQ8NFU4 85 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 OR1N1Q8NGS0 311 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 BRIX1Q8TDN6 353 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 APOBEC4Q8WW27 367 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 KAT2AQ92830 837 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 RIT1Q92963 219 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 ZBED6CLQ96FA7 236 aaPredicted RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 RBM18Q96H35 190 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 SENP5Q96HI0 755 aaPredicted RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 MS4A3Q96HJ5 214 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 THOC3Q96J01 351 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 VPS50Q96JG6 964 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 BBS4Q96RK4 519 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 DUSP26Q9BV47 211 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 NMUR2Q9GZQ4 415 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 LHPPQ9H008 270 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 NSRP1Q9H0G5 558 aaKnown RBP7.59□□□□□ -1.19
CDH13-208ENST00000566333 CXorf36Q9H7Y0 433 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 SERHLQ9NQF3 203 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 GIMAP4Q9NUV9 329 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 ATAD3AQ9NVI7 634 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 GPR83Q9NYM4 423 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 ADAM21Q9UKJ8 722 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 PSME2Q9UL46 239 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 MAPRE3Q9UPY8 281 aa7.59□□□□□ -1.19
CDH13-208ENST00000566333 NINQ8N4C6 2090 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 SVILO95425 2214 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 A0A087WV62 115 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 K7EM74 188 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 UPK1AO00322 258 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 PLOD2O00469 737 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 RNASET2O00584 256 aaKnown RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 ZNF354AO60765 605 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 NME6O75414 186 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 SLITRK5O94991 958 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 C6orf47O95873 294 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 PDGFAP04085 211 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 PGRP06401 933 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ITGA3P26006 1051 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 PTPN6P29350 595 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 MPIP34949 423 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 CDKN2CP42773 168 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 EMDP50402 254 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 CLCN2P51788 898 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 STX1BP61266 288 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 HBA1P69905 142 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 RNF4P78317 190 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 IRX1P78414 480 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 SRSF11Q05519 484 aaKnown RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 MYBPC3Q14896 1274 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 PGS1Q32NB8 556 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 EXOSC6Q5RKV6 272 aaKnown RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 METTL21CQ5VZV1 264 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 B3GNTL1Q67FW5 361 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 FCRLBQ6BAA4 426 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 JMJD6Q6NYC1 403 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 RNF111Q6ZNA4 994 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 GK5Q6ZS86 529 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 PIGWQ7Z7B1 504 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ANKRD46Q86W74 232 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 CPSF7Q8N684 471 aaKnown RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 SIRT6Q8N6T7 355 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 GLB1L3Q8NCI6 653 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 OR52R1Q8NGF1 315 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 OR8K3Q8NH51 312 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 C16orf52Q8NHV5 167 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ZFP28Q8NHY6 868 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 VPS33AQ96AX1 596 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ERP27Q96DN0 273 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms