RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 RAB39BQ96DA2 213 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 MINDY3Q9H8M7 445 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 AHSPQ9NZD4 102 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ENTPD4Q9Y227 616 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 XIRP1Q702N8 1843 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 MTMR11A4FU01 709 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ZNF705GA8MUZ8 300 aaPredicted RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 KCNK1O00180 336 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 PIP5K1BO14986 540 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 VIPP01282 170 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 OR56A5P0C7T3 313 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 RNF224P0DH78 156 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 HOXB9P17482 250 aaPredicted RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 CD40P25942 277 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ITGB8P26012 769 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 MAP4K2Q12851 820 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 EIF4HQ15056 248 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 NTRK2Q16620 822 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ATG9BQ674R7 924 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CHRDL2Q6WN34 429 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 DENND1CQ8IV53 801 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 TP53INP2Q8IXH6 220 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 OR8J3Q8NGG0 315 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 OR6K6Q8NGW6 343 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 OR6S1Q8NH40 331 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 TRMT10AQ8TBZ6 339 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 SLC22A18Q96BI1 424 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 FAM120BQ96EK7 910 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 ZDHHC15Q96MV8 337 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CAMK1GQ96NX5 476 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 SLC38A3Q99624 504 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 VRK1Q99986 396 aaPredicted RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 UTS2RQ9UKP6 389 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 NDRG2Q9UN36 371 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 PCDHA10Q9Y5I2 948 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 HPGDSO60760 199 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CD2P06729 351 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 LPLP06858 475 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 PIPP12273 146 aaPredicted RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 DPEP1P16444 411 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 IL1RNP18510 177 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 IFNGR2P38484 337 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CLCN4P51793 760 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CLCN7P51798 805 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 PNLIPRP1P54315 467 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 TCP10Q12799 353 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 EEF1DP3Q658K8 133 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 NCBP2-AS2Q69YL0 99 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CLEC6AQ6EIG7 209 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 SEZ6L2Q6UXD5 910 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CENPVQ7Z7K6 275 aaPredicted RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 DMRTC2Q8IXT2 367 aaPredicted RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 OR56B2PQ8NGI1 322 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 OR4C15Q8NGM1 316 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 MAFIPQ8WZ33 124 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 GFM1Q96RP9 751 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 TMEM209Q96SK2 561 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 MRPL4Q9BYD3 311 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 MED28Q9H204 178 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ACTL8Q9H568 366 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 PRDM9Q9NQV7 894 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ABCB8Q9NUT2 735 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 HACL1Q9UJ83 578 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 SCP2D1Q9UJQ7 156 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ACSL6Q9UKU0 697 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 NCKAP1Q9Y2A7 1128 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 PLEKHM1Q9Y4G2 1056 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ADAMTS4O75173 837 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 RPS6KA4O75676 772 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 EPOP01588 193 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 SLURP2P0DP57 97 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 PRF1P14222 555 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 PTPRAP18433 802 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ACADLP28330 430 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 RBM34P42696 430 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 CLDN8P56748 225 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CRYZQ08257 329 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 ZNF155Q12901 538 aaPredicted RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 FLYWCH1Q4VC44 716 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 RGMBQ6NW40 437 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ANKRD54Q6NXT1 300 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 MOB2Q70IA6 237 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 KCNMB4Q86W47 210 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 NUDT13Q86X67 352 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ZNF567Q8N184 647 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 ZSCAN1Q8NBB4 408 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 IP6K3Q96PC2 410 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 FAM83CQ9BQN1 747 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 SORBS1Q9BX66 1292 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 AGO4Q9HCK5 861 aaKnown RBP2.78□□□□□ -1.96
CHD9-218ENST00000566029 GDE1Q9NZC3 331 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 SLC2A6Q9UGQ3 507 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 HYKKA2RU49 373 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CD8B2A6NJW9 211 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 FAM220BPB1ANY3 271 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 TMEM229AB2RXF0 380 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 SGK494L7N484 410 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 CYP4B1P13584 511 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 HLA-EP13747 358 aa2.78□□□□□ -1.96
CHD9-218ENST00000566029 KCNJ3P48549 501 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms