RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 RFPL3SP0C7P2 107 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 PORP16435 677 aaPredicted RBP18.27■□□□□ 0.52
CLN6-206ENST00000565471 IGFBP2P18065 325 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 TSPAN8P19075 237 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 NT5EP21589 574 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 ELAVL4P26378 380 aaKnown RBP18.27■□□□□ 0.52
CLN6-206ENST00000565471 TMED10P49755 219 aaKnown RBP18.27■□□□□ 0.52
CLN6-206ENST00000565471 TRA2BP62995 288 aaKnown RBP18.27■□□□□ 0.52
CLN6-206ENST00000565471 TEX35Q5T0J7 233 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 WLSQ5T9L3 541 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 ZNF585AQ6P3V2 769 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 B3GNT6Q6ZMB0 384 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 MEX3BQ6ZN04 569 aaKnown RBP18.27■□□□□ 0.52
CLN6-206ENST00000565471 ADIPOR1Q96A54 375 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 ZNF382Q96SR6 550 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 SECISBP2Q96T21 854 aaKnown RBP18.27■□□□□ 0.52
CLN6-206ENST00000565471 TTYH2Q9BSA4 534 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 DOHHQ9BU89 302 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 EXO5Q9H790 373 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 B4GALT7Q9UBV7 327 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 FETUBQ9UGM5 382 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 ACAD8Q9UKU7 415 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 PCDHGB3Q9Y5G1 929 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 FAM215AQ9Y5M1 114 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 NPFFR2Q9Y5X5 522 aa18.27■□□□□ 0.52
CLN6-206ENST00000565471 SUPT7LO94864 414 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 TOXO94900 526 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 ATP1B1P05026 303 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 HOXD4P09016 255 aaPredicted RBP18.26■□□□□ 0.51
CLN6-206ENST00000565471 ENDOUP21128 410 aaKnown RBP18.26■□□□□ 0.51
CLN6-206ENST00000565471 NRG3P56975 720 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 TFF3Q07654 80 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 RASA2Q15283 850 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 UNC50Q53HI1 259 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 ZNF678Q5SXM1 525 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 CCDC71Q8IV32 467 aaPredicted RBP18.26■□□□□ 0.51
CLN6-206ENST00000565471 ACMSDQ8TDX5 336 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 DIO2Q92813 273 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 TM4SF18Q96CE8 201 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 ZNF597Q96LX8 424 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 KCNJ16Q9NPI9 418 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 TNFRSF10DQ9UBN6 386 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 STK38LQ9Y2H1 464 aa18.26■□□□□ 0.51
CLN6-206ENST00000565471 FAM90A27PA6NNH2 459 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 MANBAO00462 879 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 DLX3O60479 287 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 TRIM3O75382 744 aaPredicted RBP18.25■□□□□ 0.51
CLN6-206ENST00000565471 KRT6AP02538 564 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 KRT6BP04259 564 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 GLI4P10075 376 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 GABRA1P14867 456 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 CSNK2A2P19784 350 aaPredicted RBP18.25■□□□□ 0.51
CLN6-206ENST00000565471 S1PR1P21453 382 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 GPX3P22352 226 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 ATP5F1P24539 256 aaPredicted RBP18.25■□□□□ 0.51
CLN6-206ENST00000565471 DEKP35659 375 aaKnown RBP18.25■□□□□ 0.51
CLN6-206ENST00000565471 KRT6CP48668 564 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 MAP4K2Q12851 820 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 CSTF3Q12996 717 aaKnown RBP18.25■□□□□ 0.51
CLN6-206ENST00000565471 PRICKLE4Q2TBC4 344 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 TMEM198Q66K66 360 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 RTL6Q6ICC9 239 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 TMEM64Q6YI46 380 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 VWA5B2Q8N398 1253 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 C1orf52Q8N6N3 182 aaKnown RBP18.25■□□□□ 0.51
CLN6-206ENST00000565471 CDYL2Q8N8U2 506 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 SPPL2AQ8TCT8 520 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 CHTF18Q8WVB6 975 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 JSRP1Q96MG2 331 aaPredicted RBP18.25■□□□□ 0.51
CLN6-206ENST00000565471 TMEM237Q96Q45 408 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 FAIM2Q9BWQ8 316 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 SPRR3Q9UBC9 169 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 VPS29Q9UBQ0 182 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 PSME2Q9UL46 239 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 CFL2Q9Y281 166 aa18.25■□□□□ 0.51
CLN6-206ENST00000565471 HCFC1P51610 2035 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 NKX2-6A6NCS4 301 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 FOXO6A8MYZ6 492 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 SNX4O95219 450 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 LRATO95237 230 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 GSTA1P08263 222 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 IMPDH1P20839 514 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 MSX1P28360 303 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 FBXW4P57775 412 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 RPP38P78345 283 aaKnown RBP18.24■□□□□ 0.51
CLN6-206ENST00000565471 MGAT2Q10469 447 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 C1orf185Q5T7R7 199 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 GPRIN3Q6ZVF9 776 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 SLC22A9Q8IVM8 553 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 NEIL3Q8TAT5 605 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 HBEGFQ99075 208 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 ANGPTL4Q9BY76 406 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 TXLNGYQ9BZA5 131 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 UCK2Q9BZX2 261 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 NPDC1Q9NQX5 325 aaPredicted RBP18.24■□□□□ 0.51
CLN6-206ENST00000565471 MAT2BQ9NZL9 334 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 PSMC3IPQ9P2W1 217 aaPredicted RBP18.24■□□□□ 0.51
CLN6-206ENST00000565471 ZNF639Q9UID6 485 aa18.24■□□□□ 0.51
CLN6-206ENST00000565471 NCKAP5O14513 1909 aa18.23■□□□□ 0.51
CLN6-206ENST00000565471 NINQ8N4C6 2090 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms