RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 STX1AQ16623 288 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 KBTBD12Q3ZCT8 623 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 ZNF789Q5FWF6 425 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 HERC4Q5GLZ8 1057 aaPredicted RBP3.26□□□□□ -1.89
UBR1-205ENST00000564540 KCTD11Q693B1 232 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 ADAMTSL5Q6ZMM2 481 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 SYCP3Q8IZU3 236 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 LINC00518Q8N0U6 118 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 GPR137CQ8N3F9 429 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 Q8N9G6 341 aaPredicted RBP3.26□□□□□ -1.89
UBR1-205ENST00000564540 OR6M1Q8NGM8 313 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 FAF2Q96CS3 445 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 PRAM1Q96QH2 718 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 OR5M11Q96RB7 305 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 SPAG8Q99932 426 aaPredicted RBP3.26□□□□□ -1.89
UBR1-205ENST00000564540 NAPBQ9H115 298 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 RNPEPL1Q9HAU8 725 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 RAI14Q9P0K7 980 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 CIDEBQ9UHD4 219 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 DIMT1Q9UNQ2 313 aaKnown RBP3.26□□□□□ -1.89
UBR1-205ENST00000564540 ATG4BQ9Y4P1 393 aa3.26□□□□□ -1.89
UBR1-205ENST00000564540 AFF2P51816 1311 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 ZFP92A6NM28 416 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 YJEFN3A6XGL0 299 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 NUDT14O95848 222 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 FCER2P06734 321 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 IDSP22304 550 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 COPB2P35606 906 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 KRTAP10-1P60331 282 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 MSLNQ13421 630 aaPredicted RBP3.25□□□□□ -1.89
UBR1-205ENST00000564540 ASAH1Q13510 395 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 KLF5Q13887 457 aaPredicted RBP3.25□□□□□ -1.89
UBR1-205ENST00000564540 TRADDQ15628 312 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 QRICH1Q2TAL8 776 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 MS4A13Q5J8X5 152 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 TAF3Q5VWG9 929 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 TATDN1Q6P1N9 297 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 CD164L2Q6UWJ8 174 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 GPR142Q7Z601 462 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 KRT77Q7Z794 578 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 GLYATL1Q969I3 302 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 MAGEB18Q96M61 343 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 DDX50Q9BQ39 737 aaKnown RBP3.25□□□□□ -1.89
UBR1-205ENST00000564540 CACNG6Q9BXT2 260 aa3.25□□□□□ -1.89
UBR1-205ENST00000564540 DDX28Q9NUL7 540 aaKnown RBP3.25□□□□□ -1.89
UBR1-205ENST00000564540 A0A0A6YYD4 124 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 WI2-2373I1.2A0A1W2PRP0 233 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 PVRP15151 417 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 ARHGDIBP52566 201 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 RIPK4P57078 832 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 RPS4XP62701 263 aaKnown RBP3.24□□□□□ -1.89
UBR1-205ENST00000564540 ASIC1P78348 528 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 YWHAHQ04917 246 aaPredicted RBP3.24□□□□□ -1.89
UBR1-205ENST00000564540 SCARB2Q14108 478 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 STXBP2Q15833 593 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 TYSND1Q2T9J0 566 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 EPC2Q52LR7 807 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 MPPE1Q53F39 396 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 TCHHL1Q5QJ38 904 aaPredicted RBP3.24□□□□□ -1.89
UBR1-205ENST00000564540 C1QTNF12Q5T7M4 302 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 DDI2Q5TDH0 399 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 RTL6Q6ICC9 239 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 LUZP1Q86V48 1076 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 ZNF677Q86XU0 584 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 UNC5CLQ8IV45 518 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 CEND1Q8N111 149 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 ZNF285Q96NJ3 590 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 JPH2Q9BR39 696 aaPredicted RBP3.24□□□□□ -1.89
UBR1-205ENST00000564540 FUNDC2Q9BWH2 189 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 GRPEL1Q9HAV7 217 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 KLRF1Q9NZS2 232 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 CNIH4Q9P003 139 aa3.24□□□□□ -1.89
UBR1-205ENST00000564540 STX6O43752 255 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 GMNNO75496 209 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 WNT2P09544 360 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 CYP3A5P20815 502 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 SERPINH1P50454 418 aaKnown RBP3.23□□□□□ -1.89
UBR1-205ENST00000564540 SLC12A3P55017 1021 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 ZNF33BQ06732 778 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 GK2Q14410 553 aaPredicted RBP3.23□□□□□ -1.89
UBR1-205ENST00000564540 PRAMEF8Q5VWM4 474 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 ARMC3Q5W041 872 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 LINC00696Q6ZRV3 163 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 APOBEC3FQ8IUX4 373 aaKnown RBP3.23□□□□□ -1.89
UBR1-205ENST00000564540 STHQ8IWL8 128 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 OR13F1Q8NGS4 319 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 C19orf43Q9BQ61 176 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 FAM173AQ9BQD7 235 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 TRIM9Q9C026 710 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 DCTPP1Q9H773 170 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 TUBGCP4Q9UGJ1 667 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 KLHL21Q9UJP4 597 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 LEF1Q9UJU2 399 aaPredicted RBP3.23□□□□□ -1.89
UBR1-205ENST00000564540 EMCNQ9ULC0 261 aa3.23□□□□□ -1.89
UBR1-205ENST00000564540 A0A1W2PRQ8 180 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 SH2D1BO14796 132 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 PSMA7O14818 248 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 REC8O95072 547 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 STIP1P31948 543 aaKnown RBP3.22□□□□□ -1.89
UBR1-205ENST00000564540 GEMP55040 296 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms