RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 XKRXQ6PP77 449 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 RGS9BPQ6ZS82 235 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 PRR22Q8IZ63 422 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 TAGAPQ8N103 731 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 CNPY4Q8N129 248 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 FBXW8Q8N3Y1 598 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 FAM109AQ8N4B1 249 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 GBP7Q8N8V2 638 aaPredicted RBP23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 CCDC63Q8NA47 563 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 SIMC1Q8NDZ2 872 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 MARVELD3Q96A59 401 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 CCDC126Q96EE4 140 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 VKORC1Q9BQB6 163 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 MAT2BQ9NZL9 334 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 MCM8Q9UJA3 840 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 KLF2Q9Y5W3 355 aaPredicted RBP23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 CENPEQ02224 2701 aa23.28■■□□□ 1.32
AC009041.3-201ENST00000564390 GNG14A0A1W2PPG7 69 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 ATP1B1P05026 303 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 S1PR1P21453 382 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 SERPINB3P29508 390 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 FBXW4P57775 412 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 TRA2BP62995 288 aaKnown RBP23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 ACSM2AQ08AH3 577 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 DUSP8Q13202 625 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 PRICKLE4Q2TBC4 344 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 ACSM2BQ68CK6 577 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 FRMD7Q6ZUT3 714 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 MARVELD2Q8N4S9 558 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 CNRIP1Q96F85 164 aaPredicted RBP23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 SHCBP1LQ9BZQ2 653 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 PPCSQ9HAB8 311 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 PROK2Q9HC23 129 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 PFDN4Q9NQP4 134 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 TNFRSF10DQ9UBN6 386 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 CNOT11Q9UKZ1 510 aaKnown RBP23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 DLGAP4Q9Y2H0 992 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 TEX15Q9BXT5 2789 aa23.27■■□□□ 1.32
AC009041.3-201ENST00000564390 NPIPA2E9PIF3 369 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 NPIPA3F8WFD2 350 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 COPEO14579 308 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 KRT4P19013 534 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 CSNK2A2P19784 350 aaPredicted RBP23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 GPX3P22352 226 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 CRHR1P34998 444 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 VSNL1P62760 191 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 MGAT2Q10469 447 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 NTRK2Q16620 822 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 CCDC153Q494R4 210 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 SPIN4Q56A73 249 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 PAOXQ6QHF9 649 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 DND1Q8IYX4 353 aaKnown RBP23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 SLC34A3Q8N130 599 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 RPRMLQ8N4K4 120 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 OR7G1Q8NGA0 311 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 PHF10Q8WUB8 498 aaKnown RBP23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 ADIPOR1Q96A54 375 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 JSRP1Q96MG2 331 aaPredicted RBP23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 TNFRSF12AQ9NP84 129 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 BCAP29Q9UHQ4 241 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 UTS2RQ9UKP6 389 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 GRID1Q9ULK0 1009 aa23.26■■□□□ 1.31
AC009041.3-201ENST00000564390 LRRC3CA6NJW4 275 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 HNRNPRO43390 633 aaKnown RBP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 CDH16O75309 829 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 RFPL3SP0C7P2 107 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 TIA1P31483 386 aaKnown RBP eCLIP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 SOX18P35713 384 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 CCT5P48643 541 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 RPS6KA2Q15349 733 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 ZNF630Q2M218 657 aaPredicted RBP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 EMC4Q5J8M3 183 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 CFAP157Q5JU67 520 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 BICRALQ6AI39 1079 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 LRRC25Q8N386 305 aaPredicted RBP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 OR5M9Q8NGP3 310 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 TP53INP1Q96A56 240 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 EXOSC8Q96B26 276 aaKnown RBP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 ZNF681Q96N22 645 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 SMC6Q96SB8 1091 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 ITPAQ9BY32 194 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 NXF5Q9H1B4 397 aaKnown RBP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 ZNF703Q9H7S9 590 aaPredicted RBP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 PNPLA3Q9NST1 481 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 CNIH4Q9P003 139 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 PSME2Q9UL46 239 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 BOKQ9UMX3 212 aaPredicted RBP23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 NPFFR2Q9Y5X5 522 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 ZNF780BQ9Y6R6 833 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 NCKAP5O14513 1909 aa23.25■■□□□ 1.31
AC009041.3-201ENST00000564390 EXPH5Q8NEV8 1989 aa23.24■■□□□ 1.31
AC009041.3-201ENST00000564390 TLDC2A0PJX2 215 aa23.24■■□□□ 1.31
AC009041.3-201ENST00000564390 CCDC151A5D8V7 595 aa23.24■■□□□ 1.31
AC009041.3-201ENST00000564390 IGHG3P01860 377 aa23.24■■□□□ 1.31
AC009041.3-201ENST00000564390 SNRPB2P08579 225 aaKnown RBP23.24■■□□□ 1.31
AC009041.3-201ENST00000564390 PRF1P14222 555 aa23.24■■□□□ 1.31
AC009041.3-201ENST00000564390 CPA3P15088 417 aa23.24■■□□□ 1.31
AC009041.3-201ENST00000564390 PCSK2P16519 638 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms