RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ATP6AP1Q15904 470 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 DEFB110Q30KQ9 67 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 AMZ1Q400G9 498 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 LRRC23Q53EV4 343 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 REEP3Q6NUK4 255 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 TMEM71Q6P5X7 295 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 TLDC1Q6P9B6 456 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 TREML4Q6UXN2 200 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 IZUMO2Q6UXV1 221 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CEACAM20Q6UY09 585 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CCDC80Q76M96 950 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF551Q7Z340 670 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SZRD1Q7Z422 152 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 C6orf120Q7Z4R8 191 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 RNF130Q86XS8 419 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PTOV1Q86YD1 416 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 GATAD2AQ86YP4 633 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF595Q8IYB9 648 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CA13Q8N1Q1 262 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 D2HGDHQ8N465 521 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 ANKFN1Q8N957 763 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 OR5AK3PQ8NH89 298 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 FBXO30Q8TB52 745 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 MIPOL1Q8TD10 442 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 NRG4Q8WWG1 115 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 LRTOMTQ8WZ04 291 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 KLHL6Q8WZ60 621 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SLCO4A1Q96BD0 722 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SDCCAG3Q96C92 435 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CNRIP1Q96F85 164 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CENPNQ96H22 339 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PYURFQ96I23 114 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SLC41A2Q96JW4 573 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 BTBD9Q96Q07 612 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SEPHS2Q99611 448 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PKP2Q99959 881 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PELOQ9BRX2 385 aaKnown RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 C9orf16Q9BUW7 83 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 Q9H521 79 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 EPS8L2Q9H6S3 715 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 A4GALTQ9NPC4 353 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SIRT3Q9NTG7 399 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 C5AR2Q9P296 337 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PTGFRNQ9P2B2 879 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 P2RX2Q9UBL9 471 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 RAPGEFL1Q9UHV5 662 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SERTAD3Q9UJW9 196 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 USP22Q9UPT9 525 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 ERVK-11Q9UQG0 969 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 LRRC42Q9Y546 428 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PCDHGB2Q9Y5G2 931 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 KNL1Q8NG31 2342 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 NUP210LQ5VU65 1888 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 BDP1A6H8Y1 2624 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 NCOR1O75376 2440 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 DUXAA6NLW8 204 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 PLOD2O00469 737 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CYR61O00622 381 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 SUV39H1O43463 412 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 B4GAT1O43505 415 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 SIGLEC6O43699 453 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 KIF1CO43896 1103 aaKnown RBP9.11□□□□□ -0.95
UBFD1-202ENST00000563366 PRAMEF10O60809 474 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 TIPRLO75663 272 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF682O95780 498 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 GPR75O95800 540 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CAPNS1P04632 268 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ATP1B1P05026 303 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CKMT1AP12532 417 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ETFAP13804 333 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CPMP14384 443 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 NELFEP18615 380 aaKnown RBP9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ATP6V1C1P21283 382 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 PEX2P28328 305 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 MPLP40238 635 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 GRK6P43250 576 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CDK9P50750 372 aaKnown RBP9.11□□□□□ -0.95
UBFD1-202ENST00000563366 XKP51811 444 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ITGA1P56199 1179 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 SHC2P98077 582 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ACY1Q03154 408 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 RUNX2Q13950 521 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ADRM1Q16186 407 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 PRSS53Q2L4Q9 553 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 WLSQ5T9L3 541 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 PRAMEF8Q5VWM4 474 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 PRAMEF7Q5VXH5 474 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 NKAIN2Q5VXU1 208 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 RNF111Q6ZNA4 994 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 C8orf86Q6ZUL3 223 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CBLL1Q75N03 491 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 EIF3MQ7L2H7 374 aaKnown RBP9.11□□□□□ -0.95
UBFD1-202ENST00000563366 WFDC8Q8IUA0 241 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 LILRA2Q8N149 483 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ARHGEF39Q8N4T4 335 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 Q8N9G6 341 aaPredicted RBP9.11□□□□□ -0.95
UBFD1-202ENST00000563366 OR4D9Q8NGE8 314 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 SUN3Q8TAQ9 357 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 NETO1Q8TDF5 533 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 TBC1D20Q96BZ9 403 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms