RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FNDC4Q9H6D8 234 aaPredicted RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 MTHFD2LQ9H903 347 aaPredicted RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 MIS18AQ9NYP9 233 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ATXN10Q9UBB4 475 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 P2RX2Q9UBL9 471 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 EIF3KQ9UBQ5 218 aaKnown RBP2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 LHX3Q9UBR4 397 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 KLK11Q9UBX7 282 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 LNPEPQ9UIQ6 1025 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 CHMP2BQ9UQN3 213 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF175Q9Y473 711 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 KIF3AQ9Y496 699 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 WIPI2Q9Y4P8 454 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 RNF215Q9Y6U7 377 aa2.73□□□□□ -1.97
SHCBP1-202ENST00000563219 ZMYM6O95789 1325 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 UMODL1Q5DID0 1318 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 A0A1B0GVY2 172 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 NKX6-3A6NJ46 265 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 MEI4A8MW99 385 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 E2F3O00716 465 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 PDXKO00764 312 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 CLDN3O15551 220 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 DCXO43602 365 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 MTX2O75431 263 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 TM7SF2O76062 418 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 FGF19O95750 216 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 HPRP00739 348 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 SERPINF2P08697 491 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZSCAN5DPP0CG00 497 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 DPEP1P16444 411 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 PDHA2P29803 388 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 RFC2P35250 354 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ADRA1AP35348 466 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 SOX6P35712 828 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ALDH3B1P43353 468 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 SRYQ05066 204 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 MFGE8Q08431 387 aaPredicted RBP2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ITPK1Q13572 414 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 MEF2DQ14814 521 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 SLC17A1Q14916 467 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 NCAPD2Q15021 1401 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ECSCRQ19T08 205 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 MTHFSDQ2M296 383 aaKnown RBP2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 CCDC57Q2TAC2 916 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 PNCKQ6P2M8 343 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 CES3Q6UWW8 571 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 CWC27Q6UX04 472 aaKnown RBP2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 KIF6Q6ZMV9 814 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 P4HA3Q7Z4N8 544 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZER1Q7Z7L7 766 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 GPBP1Q86WP2 473 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 CENPLQ8N0S6 344 aaPredicted RBP2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 PYROXD2Q8N2H3 581 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 CENPSQ8N2Z9 138 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF485Q8NCK3 441 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ICA1LQ8NDH6 482 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 CHDHQ8NE62 594 aaPredicted RBP2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 PRSS33Q8NF86 280 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF397Q8NF99 534 aaPredicted RBP2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 C11orf45Q8TAV5 145 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF519Q8TB69 540 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 RDH11Q8TC12 318 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 TCP11Q8WWU5 503 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 P3H4Q92791 437 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 C4orf36Q96KX1 117 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF599Q96NL3 588 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 SYT11Q9BT88 431 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 APOOQ9BUR5 198 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 LRRCC1Q9C099 1032 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 RAB33BQ9H082 229 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 IL1RAPQ9NPH3 570 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 B3GAT2Q9NPZ5 323 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZNF346Q9UL40 294 aaKnown RBP2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 FOXJ3Q9UPW0 622 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 PRSS21Q9Y6M0 314 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 ZHX2Q9Y6X8 837 aa2.72□□□□□ -1.97
SHCBP1-202ENST00000563219 COL2A1P02458 1487 aaPredicted RBP2.71□□□□□ -1.97
SHCBP1-202ENST00000563219 A0A0J9YVX5 310 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 A0A1B0GU03 582 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 A0A1B0GUL7 405 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 TRIM64CA6NLI5 447 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 GPR89AB7ZAQ6 455 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 G3V2L1 256 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 H0YL77 283 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 H7C423 109 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 SDHDO14521 159 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 CFLARO15519 480 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 RIPK2O43353 540 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 OR4F21O95013 312 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 UGT2B4P06133 528 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ANXA4P09525 319 aaPredicted RBP2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 GPR89BP0CG08 455 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 TRIM49P0CI25 452 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 TRIM49CP0CI26 452 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 CLUP10909 449 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 PDHBP11177 359 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 TNNI3P19429 210 aa2.71□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF10P21506 573 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms