RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 EXTL1Q92935 676 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 CTHRC1Q96CG8 243 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 ELP4Q96EB1 424 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 VMP1Q96GC9 406 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 FBXL20Q96IG2 436 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 ART5Q96L15 291 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 SEMA4CQ9C0C4 833 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 LHPPQ9H008 270 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 ZNF385DQ9H6B1 395 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 ANKRA2Q9H9E1 313 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 MMP25Q9NPA2 562 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 ZNF639Q9UID6 485 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 PCDHGB4Q9UN71 923 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 ERVK-19Q9WJR5 959 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 CEP295Q9C0D2 2601 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 CELSR3Q9NYQ7 3312 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 MED13Q9UHV7 2174 aa9.57□□□□□ -0.88
LRRC28-221ENST00000561276 TNRC6AQ8NDV7 1962 aaKnown RBP9.56□□□□□ -0.88
LRRC28-221ENST00000561276 CPAMD8Q8IZJ3 1885 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 FAM234BA2RU67 622 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 A8MUI8 341 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 PLOD2O00469 737 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 RNASET2O00584 256 aaKnown RBP9.56□□□□□ -0.88
LRRC28-221ENST00000561276 PLOD3O60568 738 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 IGKV3-11P04433 115 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 CD1EP15812 388 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 SLC37A1P57057 533 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 AP2B1P63010 937 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 RAPSNQ13702 412 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 ZNF628Q5EBL2 1059 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 H3F3CQ6NXT2 135 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 JMJD6Q6NYC1 403 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-221ENST00000561276 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 TMEM107Q6UX40 140 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 HSDL2Q6YN16 418 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 ANKRD46Q86W74 232 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 CLECL1Q8IZS7 167 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 SIRT6Q8N6T7 355 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 ZNF615Q8N8J6 731 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 OR7G2Q8NG99 324 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 OR7G1Q8NGA0 311 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 ZNF675Q8TD23 568 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 THAP3Q8WTV1 239 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-221ENST00000561276 OR5P2Q8WZ92 322 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 PSMF1Q92530 271 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 VPS33AQ96AX1 596 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 MAGED4Q96JG8 741 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 DEFB126Q9BYW3 111 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 OR10A5Q9H207 317 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 SAR1AQ9NR31 198 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 TMEM45AQ9NWC5 275 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 FAM120CQ9NX05 1096 aaKnown RBP9.56□□□□□ -0.88
LRRC28-221ENST00000561276 COPS7AQ9UBW8 275 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 BCAP29Q9UHQ4 241 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 ZNF223Q9UK11 482 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-221ENST00000561276 ERVK-11Q9UQG0 969 aa9.56□□□□□ -0.88
LRRC28-221ENST00000561276 NUP214P35658 2090 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 TRBV11-1A0A0K0K1C0 115 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 UPK1AO00322 258 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 PRKNO60260 465 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 CCDC22O60826 627 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 CEACAM4O75871 244 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 BCAS2O75934 225 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 ZFAND5O76080 213 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 SLITRK5O94991 958 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 CPSF4O95639 269 aaKnown RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 C6orf47O95873 294 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 FAM107AO95990 144 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 CLPSP04118 112 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 ABCB1P08183 1280 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 MC3RP41968 323 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 EMDP50402 254 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 CDK9P50750 372 aaKnown RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 KCNK10P57789 538 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 HBA1P69905 142 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 RNF4P78317 190 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 UBAP2LQ14157 1087 aaKnown RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 MYBPC3Q14896 1274 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 MAPKAPK3Q16644 382 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 LINC00303Q3SY05 128 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 FHL5Q5TD97 284 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 IRAK1BP1Q5VVH5 260 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 RNF111Q6ZNA4 994 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 MTERF4Q7Z6M4 381 aaKnown RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 MTDHQ86UE4 582 aaKnown RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 FDCSPQ8NFU4 85 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 OR8K3Q8NH51 312 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 PSMA8Q8TAA3 256 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 BRIX1Q8TDN6 353 aaKnown RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 ERP27Q96DN0 273 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 ARHGAP9Q9BRR9 750 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 CDCP1Q9H5V8 836 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 ZNF552Q9H707 407 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 LIN28AQ9H9Z2 209 aaKnown RBP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 C3orf14Q9HBI5 128 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 SLC52A3Q9NQ40 469 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 MRGBPQ9NV56 204 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.55□□□□□ -0.88
LRRC28-221ENST00000561276 TAS2R9Q9NYW1 312 aa9.55□□□□□ -0.88
LRRC28-221ENST00000561276 STMN3Q9NZ72 180 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms