RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ANGPT1Q15389 498 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 LTB4RQ15722 352 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 MAPK11Q15759 364 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 FHL5Q5TD97 284 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 OR2T5Q6IEZ7 315 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 KRT73Q86Y46 540 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 HIPK1Q86Z02 1210 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 OR4N5Q8IXE1 308 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 GPR135Q8IZ08 494 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 MARVELD2Q8N4S9 558 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 EID2Q8N6I1 236 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 C7orf57Q8NEG2 295 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 OR7G2Q8NG99 324 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 OR4D9Q8NGE8 314 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 OR2T29Q8NH02 315 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 BBS10Q8TAM1 723 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 XAGE5Q8WWM1 108 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 GEMIN6Q8WXD5 167 aaKnown RBP16.06■□□□□ 0.16
HDDC3-206ENST00000561036 KAT2AQ92830 837 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 COL26A1Q96A83 441 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 GIMAP5Q96F15 307 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 NRBF2Q96F24 287 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 ZNF347Q96SE7 839 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 NUDT22Q9BRQ3 303 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 SPATA5L1Q9BVQ7 753 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 FANCEQ9HB96 536 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 THSD1Q9NS62 852 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 CUTCQ9NTM9 273 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 TMEM9Q9P0T7 183 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 SERTAD3Q9UJW9 196 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 RAB23Q9ULC3 237 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 PCDHGA5Q9Y5G8 931 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 AP4B1Q9Y6B7 739 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 PCDH15Q96QU1 1955 aa16.06■□□□□ 0.16
HDDC3-206ENST00000561036 A0A0G2JPF8 293 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 HNRNPCL2B2RXH8 293 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 PATE3B3GLJ2 98 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 HNRNPCL3B7ZW38 293 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 PDLIM1O00151 329 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 LDB3O75112 727 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 SERPINB7O75635 380 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 HNRNPCL4P0DMR1 293 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 CKMT1AP12532 417 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 ETS2P15036 469 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 ITGA2P17301 1181 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 ALDH3A2P51648 485 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 CRISP3P54108 245 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 ITGA1P56199 1179 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 HSD17B7P56937 341 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 KCNAB1Q14722 419 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 PROX2Q3B8N5 592 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 IQCCQ4KMZ1 466 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 SNAP47Q5SQN1 464 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 PERM1Q5SV97 790 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 ATAD3BQ5T9A4 648 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 MFSD12Q6NUT3 480 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 CDC73Q6P1J9 531 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 OR10Q1Q8NGQ4 319 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 MMABQ96EY8 250 aaPredicted RBP16.05■□□□□ 0.16
HDDC3-206ENST00000561036 RDH12Q96NR8 316 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 TRNT1Q96Q11 434 aaKnown RBP16.05■□□□□ 0.16
HDDC3-206ENST00000561036 OR7D2Q96RA2 312 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 TREX2Q9BQ50 279 aaPredicted RBP16.05■□□□□ 0.16
HDDC3-206ENST00000561036 BTBD2Q9BX70 525 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 LRRN3Q9H3W5 708 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 EXD2Q9NVH0 621 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 USE1Q9NZ43 259 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 HCN3Q9P1Z3 774 aa16.05■□□□□ 0.16
HDDC3-206ENST00000561036 IFT80Q9P2H3 777 aaPredicted RBP16.05■□□□□ 0.16
HDDC3-206ENST00000561036 PI4KAP42356 2102 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 EI24O14681 340 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 E2F6O75461 281 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 MFN2O95140 757 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 NT5EP21589 574 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 DCTP40126 519 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 ARHGDIAP52565 204 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 CCL7P80098 99 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 VLDLRP98155 873 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 KCNC4Q03721 635 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 MGAT2Q10469 447 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 MAP4K2Q12851 820 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 DAG1Q14118 895 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 GK3PQ14409 553 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 PRICKLE4Q2TBC4 344 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 NHSL2Q5HYW2 709 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 EXOSC6Q5RKV6 272 aaKnown RBP16.04■□□□□ 0.16
HDDC3-206ENST00000561036 SHQ1Q6PI26 577 aaKnown RBP16.04■□□□□ 0.16
HDDC3-206ENST00000561036 STK32CQ86UX6 486 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 OR5D16Q8NGK9 328 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 OR51Q1Q8NH59 317 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 OR1L3Q8NH93 324 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 CTHRC1Q96CG8 243 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 C16orf58Q96GQ5 468 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 PEX11GQ96HA9 241 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 PELOQ9BRX2 385 aaKnown RBP16.04■□□□□ 0.16
HDDC3-206ENST00000561036 NDC1Q9BTX1 674 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 PRTFDC1Q9NRG1 225 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 GIN1Q9NXP7 522 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 SMPD3Q9NY59 655 aaPredicted RBP16.04■□□□□ 0.16
HDDC3-206ENST00000561036 MAT2BQ9NZL9 334 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms