RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 RASSF2P50749 326 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 C21orf58P58505 322 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 ARG2P78540 354 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 ELF3P78545 371 aaPredicted RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 ID2Q02363 134 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 NFATC3Q12968 1075 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 RAPSNQ13702 412 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 PDE7AQ13946 482 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 UBAP2LQ14157 1087 aaKnown RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 PDCD2Q16342 344 aaPredicted RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 INAQ16352 499 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 SLC29A4Q7RTT9 530 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 DND1Q8IYX4 353 aaKnown RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 VWA5B2Q8N398 1253 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 SUN3Q8TAQ9 357 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 CNRIP1Q96F85 164 aaPredicted RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 PRPF18Q99633 342 aaKnown RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF385DQ9H6B1 395 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 REEP4Q9H6H4 257 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 TRIM45Q9H8W5 580 aaPredicted RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 TCF7L2Q9NQB0 619 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 ATAD3AQ9NVI7 634 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 YARS2Q9Y2Z4 477 aaKnown RBP13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 NBEAQ8NFP9 2946 aa13.01□□□□□ -0.33
PKNOX1-209ENST00000560448 TRAV17A0A0B4J275 112 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 ATP6AP2A0A1C7CYW4 349 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 SDHDO14521 159 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 ATP6AP2O75787 350 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 CELA2AP08217 269 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 KRT16P08779 473 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 BCKDHAP12694 445 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 LBPP18428 481 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 PRPS1L1P21108 318 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 NT5EP21589 574 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 TRHRP34981 398 aaPredicted RBP13□□□□□ -0.33
PKNOX1-209ENST00000560448 HPCAL1P37235 193 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 MLF1P58340 268 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 RNF4P78317 190 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 MPEG1Q2M385 716 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 PRICKLE4Q2TBC4 344 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 LSM12Q3MHD2 195 aaKnown RBP13□□□□□ -0.33
PKNOX1-209ENST00000560448 RPUSD3Q6P087 351 aaKnown RBP13□□□□□ -0.33
PKNOX1-209ENST00000560448 RNF111Q6ZNA4 994 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 TICAM1Q8IUC6 712 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF843Q8N446 348 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 SLC15A4Q8N697 577 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 RBMXL3Q8N7X1 1067 aaKnown RBP13□□□□□ -0.33
PKNOX1-209ENST00000560448 ZFP28Q8NHY6 868 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 CTHRC1Q96CG8 243 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 ZBED6CLQ96FA7 236 aaPredicted RBP13□□□□□ -0.33
PKNOX1-209ENST00000560448 C3orf30Q96M34 536 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 UTP23Q9BRU9 249 aaKnown RBP13□□□□□ -0.33
PKNOX1-209ENST00000560448 CNPPD1Q9BV87 410 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 NUF2Q9BZD4 464 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 WDR55Q9H6Y2 383 aaPredicted RBP13□□□□□ -0.33
PKNOX1-209ENST00000560448 MYOTQ9UBF9 498 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 TAGLN3Q9UI15 199 aa13□□□□□ -0.33
PKNOX1-209ENST00000560448 GOLGA8QA0A0J9YX86 632 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 GOLGA8OA6NCC3 632 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 MYO1GB0I1T2 1018 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 GOLGA8NF8WBI6 632 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 ESRRAP11474 423 aaPredicted RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 TNFSF10P50591 281 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 IRX1P78414 480 aaPredicted RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF267Q14586 743 aaPredicted RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 IL23RQ5VWK5 629 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 FAM219BQ5XKK7 198 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 FBXW10Q5XX13 1052 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 LINC00696Q6ZRV3 163 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 RINLQ6ZS11 566 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 LARP4Q71RC2 724 aaKnown RBP eCLIP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 CPSF7Q8N684 471 aaKnown RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 TP53INP1Q96A56 240 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 EXOSC8Q96B26 276 aaKnown RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 PPWD1Q96BP3 646 aaKnown RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 TSSK3Q96PN8 268 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 BBS4Q96RK4 519 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 BTBD10Q9BSF8 475 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 CDCP1Q9H5V8 836 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 AKTIPQ9H8T0 292 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 ACSS1Q9NUB1 689 aaPredicted RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 TAS2R1Q9NYW7 299 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 PRODH2Q9UF12 536 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 ATP6V1HQ9UI12 483 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 ZNF223Q9UK11 482 aaPredicted RBP12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 ERVK-19Q9WJR5 959 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 IGSF10Q6WRI0 2623 aa12.99□□□□□ -0.33
PKNOX1-209ENST00000560448 A0A087WV62 115 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 WASHC1A8K0Z3 465 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 GABRR3A8MPY1 467 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 K7EM74 188 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 PLOD2O00469 737 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 SUV39H1O43463 412 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 MGRN1O60291 552 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 PLOD3O60568 738 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 PRAMEF2O60811 474 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 WDPCPO95876 746 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 TACR1P25103 407 aa12.98□□□□□ -0.33
PKNOX1-209ENST00000560448 EPHA3P29320 983 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms