RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 CHPT1Q8WUD6 406 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 TMEM37Q8WXS4 190 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 ATF6BQ99941 703 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 RBM4BQ9BQ04 359 aaKnown RBP4.52□□□□□ -1.69
MARK3-220ENST00000560417 KRT23Q9C075 422 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 SOHLH2Q9NX45 425 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 IL20RAQ9UHF4 553 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 MTF2Q9Y483 593 aaPredicted RBP4.52□□□□□ -1.69
MARK3-220ENST00000560417 PRSS21Q9Y6M0 314 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 KIF27Q86VH2 1401 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 CACNA1FO60840 1977 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 A0A0A6YYD4 124 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 A0A0J9YWU9 116 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 A8MXK9 166 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 POP4O95707 220 aaKnown RBP4.51□□□□□ -1.69
MARK3-220ENST00000560417 PTBP3O95758 552 aaKnown RBP4.51□□□□□ -1.69
MARK3-220ENST00000560417 PROS1P07225 676 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 DNAJB1P25685 340 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 CAMLGP49069 296 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 ATP4BP51164 291 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 FUT7Q11130 342 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 PDIA5Q14554 519 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 SMC1AQ14683 1233 aaKnown RBP4.51□□□□□ -1.69
MARK3-220ENST00000560417 HKDC1Q2TB90 917 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 DDI2Q5TDH0 399 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 MAPK1IP1LQ8NDC0 245 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 ICA1LQ8NDH6 482 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 FAM71CQ8NEG0 241 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 OR56B1Q8NGI3 324 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 FBXO25Q8TCJ0 367 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 PHYHIPQ92561 330 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 CCDC51Q96ER9 411 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 DEFB118Q96PH6 123 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 CABLES2Q9BTV7 478 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 NLNQ9BYT8 704 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 NMNAT2Q9BZQ4 307 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 EGLN1Q9GZT9 426 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 FAM124BQ9H5Z6 455 aaPredicted RBP4.51□□□□□ -1.69
MARK3-220ENST00000560417 DCTPP1Q9H773 170 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 Q9HAA7 133 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 ACTR3BQ9P1U1 418 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 RARRES3Q9UL19 164 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 ZNF175Q9Y473 711 aa4.51□□□□□ -1.69
MARK3-220ENST00000560417 DUSP11O75319 330 aaKnown RBP4.5□□□□□ -1.69
MARK3-220ENST00000560417 SORBS2O94875 1100 aaKnown RBP4.5□□□□□ -1.69
MARK3-220ENST00000560417 HPRP00739 348 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 HCKP08631 526 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 GP9P14770 177 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 FUT1P19526 365 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 CAPGP40121 348 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 MAGEA4P43358 317 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 PAX8Q06710 450 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 SNX1Q13596 522 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 ENPP2Q13822 863 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 SHROOM1Q2M3G4 852 aaPredicted RBP4.5□□□□□ -1.69
MARK3-220ENST00000560417 UNC50Q53HI1 259 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 IL23RQ5VWK5 629 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 LIPKQ5VXJ0 399 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 ZNF343Q6P1L6 599 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 METTL7BQ6UX53 244 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 TMEM26Q6ZUK4 368 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 RNF130Q86XS8 419 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 Q8N377 158 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 NTNG2Q96CW9 530 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 ANKRD27Q96NW4 1050 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 VGLL1Q99990 258 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 CHCHD5Q9BSY4 110 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 RAB11FIP5Q9BXF6 653 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 TRIM15Q9C019 465 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 CLIP2Q9UDT6 1046 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 PLA2G4CQ9UP65 541 aa4.5□□□□□ -1.69
MARK3-220ENST00000560417 PDHXO00330 501 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 BUB1O43683 1085 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 STK17BO94768 372 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 TRIM16O95361 564 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 SEMA4FO95754 770 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 OR9G9P0C7N8 305 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 ZNF10P21506 573 aaPredicted RBP4.49□□□□□ -1.69
MARK3-220ENST00000560417 LMO2P25791 158 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 HSPA1LP34931 641 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 VEGFCP49767 419 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 GSK3BP49841 420 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 RIDAP52758 137 aaKnown RBP4.49□□□□□ -1.69
MARK3-220ENST00000560417 MYBPC1Q00872 1141 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 GABPB1Q06547 395 aaPredicted RBP4.49□□□□□ -1.69
MARK3-220ENST00000560417 SPP2Q13103 211 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 NME3Q13232 169 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 EMC2Q15006 297 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 KARSQ15046 597 aaKnown RBP4.49□□□□□ -1.69
MARK3-220ENST00000560417 ACSF3Q4G176 576 aaPredicted RBP4.49□□□□□ -1.69
MARK3-220ENST00000560417 C12orf60Q5U649 245 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 ISLR2Q6UXK2 745 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 SYVN1Q86TM6 617 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 ABHD12Q8N2K0 398 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 ZNF397Q8NF99 534 aaPredicted RBP4.49□□□□□ -1.69
MARK3-220ENST00000560417 ZNF597Q96LX8 424 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 CPXM1Q96SM3 734 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 HSD17B14Q9BPX1 270 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 NDUFAF3Q9BU61 184 aa4.49□□□□□ -1.69
MARK3-220ENST00000560417 ST6GALNAC5Q9BVH7 336 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms