RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 A0A1B0GVC2 190 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 C2orf92A0A1B0GVN3 265 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 ERAL1O75616 437 aaKnown RBP16.29■□□□□ 0.2
HDDC3-205ENST00000559898 OTCP00480 354 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 PYGBP11216 843 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 GALNSP34059 522 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 TRPC1P48995 793 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 FOXA1P55317 472 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 TFF3Q07654 80 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 BIKQ13323 160 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 NTRK2Q16620 822 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 PRICKLE4Q2TBC4 344 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 FNDC7Q5VTL7 733 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 SLC48A1Q6P1K1 146 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 SLC15A4Q8N697 577 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 ACBD4Q8NC06 268 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 KIF18AQ8NI77 898 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 PELOQ9BRX2 385 aaKnown RBP16.29■□□□□ 0.2
HDDC3-205ENST00000559898 NXF5Q9H1B4 397 aaKnown RBP16.29■□□□□ 0.2
HDDC3-205ENST00000559898 TNFRSF12AQ9NP84 129 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 TRPS1Q9UHF7 1281 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 ADAM29Q9UKF5 820 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 TACC2O95359 2948 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 OTOGQ6ZRI0 2925 aa16.29■□□□□ 0.2
HDDC3-205ENST00000559898 UBFD1O14562 309 aaKnown RBP16.28■□□□□ 0.2
HDDC3-205ENST00000559898 DYRK3O43781 588 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 PORP16435 677 aaPredicted RBP16.28■□□□□ 0.2
HDDC3-205ENST00000559898 GPX3P22352 226 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 ADH7P40394 386 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 WNT3P56703 355 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 KCNJ2P63252 427 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 MRPS35P82673 323 aaKnown RBP16.28■□□□□ 0.2
HDDC3-205ENST00000559898 HMGCS1Q01581 520 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 SLC10A1Q14973 349 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 TRMT12Q53H54 448 aaKnown RBP16.28■□□□□ 0.2
HDDC3-205ENST00000559898 TRMT10CQ7L0Y3 403 aaKnown RBP16.28■□□□□ 0.2
HDDC3-205ENST00000559898 LIX1LQ8IVB5 337 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 IFT20Q8IY31 132 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 CEP112Q8N8E3 955 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 CA5BP1Q8WTZ4 195 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 CHTF18Q8WVB6 975 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 CNRIP1Q96F85 164 aaPredicted RBP16.28■□□□□ 0.2
HDDC3-205ENST00000559898 APIPQ96GX9 242 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 LURAP1Q96LR2 239 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 ZNF681Q96N22 645 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 ITPAQ9BY32 194 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 ACPTQ9BZG2 426 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 BRINP2Q9C0B6 783 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 GSTO2Q9H4Y5 243 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 ZFP64Q9NPA5 681 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 NPFFR2Q9Y5X5 522 aa16.28■□□□□ 0.2
HDDC3-205ENST00000559898 MED12Q93074 2177 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 C2orf72A6NCS6 295 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 OR6C76A6NM76 312 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 G3V2L1 256 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 TRIM3O75382 744 aaPredicted RBP16.27■□□□□ 0.2
HDDC3-205ENST00000559898 TOXO94900 526 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 CBX7O95931 251 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 GLI4P10075 376 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 ALDH9A1P49189 494 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 MAN2A2P49641 1150 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 MEX3BQ6ZN04 569 aaKnown RBP16.27■□□□□ 0.2
HDDC3-205ENST00000559898 RGS9BPQ6ZS82 235 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 SH2D5Q6ZV89 423 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 LRRC25Q8N386 305 aaPredicted RBP16.27■□□□□ 0.2
HDDC3-205ENST00000559898 MYRIPQ8NFW9 859 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 ZNF382Q96SR6 550 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 TTYH2Q9BSA4 534 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 EBPLQ9BY08 206 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 ENKD1Q9H0I2 346 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 LDAHQ9H6V9 325 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 BRF2Q9HAW0 419 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 AHSPQ9NZD4 102 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 EHD3Q9NZN3 535 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 ZNF639Q9UID6 485 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 SNX6Q9UNH7 406 aa16.27■□□□□ 0.2
HDDC3-205ENST00000559898 INTS1Q8N201 2190 aaKnown RBP16.26■□□□□ 0.19
HDDC3-205ENST00000559898 TRGV5A0A0B4J1U4 118 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 A0A0G2JNJ9 132 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 AQP7O14520 342 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 IL3P08700 152 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 PCSK2P16519 638 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 IMPDH1P20839 514 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 ATP5F1P24539 256 aaPredicted RBP16.26■□□□□ 0.19
HDDC3-205ENST00000559898 ACVR2AP27037 513 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 SERPINB3P29508 390 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 PTGER4P35408 488 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 SLCO1A2P46721 670 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 PRKAA2P54646 552 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 BTKQ06187 659 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 PAOXQ6QHF9 649 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 GPRIN3Q6ZVF9 776 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 SEM1Q6ZVN7 128 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 PAGE2Q7Z2X7 111 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 GDF7Q7Z4P5 450 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 LILRB4Q8NHJ6 448 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 SPPL2AQ8TCT8 520 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 RND1Q92730 232 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 DIO2Q92813 273 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms