RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 HSD17B7P56937 341 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 GPX6P59796 221 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 RAB10P61026 200 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ATP6V0D1P61421 351 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ADORA2A-AS1P86434 159 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SLC7A5Q01650 507 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 TGM3Q08188 693 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ART3Q13508 389 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 TRADDQ15628 312 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 DPY19L1Q2PZI1 675 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 KRTCAP3Q53RY4 240 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 PRAMEF9Q5VWM5 478 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 IL20RBQ6UXL0 311 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SYT10Q6XYQ8 523 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 MAATS1Q7Z4T9 603 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 MDGA2Q7Z553 956 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 OR4N5Q8IXE1 308 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SLC34A3Q8N130 599 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 RNF175Q8N4F7 328 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 TEX9Q8N6V9 391 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ZNF321PQ8N8H1 164 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 APCDD1LQ8NCL9 501 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 OR2L5Q8NG80 312 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 FBXO25Q8TCJ0 367 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ASB15Q8WXK1 588 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ANKRD7Q92527 254 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SDCCAG3Q96C92 435 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 NEIL1Q96FI4 390 aaPredicted RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 VMP1Q96GC9 406 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ZNF764Q96H86 408 aaPredicted RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 SMIM10Q96HG1 83 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 QRFPRQ96P65 431 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SERINC2Q96SA4 455 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 GPR22Q99680 433 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SORBS1Q9BX66 1292 aaKnown RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 CAPS2Q9BXY5 557 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ALOXE3Q9BYJ1 711 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 DEFB127Q9H1M4 99 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 OR51B5Q9H339 312 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 POPDC3Q9HBV1 291 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ADAP2Q9NPF8 381 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 HPF1Q9NWY4 346 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 GPRC5BQ9NZH0 403 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 WHRNQ9P202 907 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 OPTCQ9UBM4 332 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ZNF223Q9UK11 482 aaPredicted RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 ITGB1BP2Q9UKP3 347 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ZNF490Q9ULM2 529 aaPredicted RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 KLF13Q9Y2Y9 288 aaPredicted RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 MMACHCQ9Y4U1 282 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 CLCA3PQ9Y6N3 262 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 BSNQ9UPA5 3926 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 GTF3C1Q12789 2109 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 A0A0G2JMM0 328 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 A0A1W2PPB8 328 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 A0A1W2PRS3 328 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 LRRC14BA6NHZ5 514 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 FAM159BA6NKW6 160 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 FAM90A27PA6NNH2 459 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 KIR3DP1A8MWS1 328 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 C17orf105B2RV13 164 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 KLRC4-KLRK1H3BQV0 150 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 C19orf84I3L1E1 186 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 EIF3HO15372 352 aaKnown RBP eCLIP6.79□□□□□ -1.324e-6■■■■■ 29.2
SPG11-213ENST00000558988 PRKRAO75569 313 aaKnown RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 ZFAND5O76080 213 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 OR6B1O95007 311 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 TUBB4AP04350 444 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 SLC35E2BP0CK96 405 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 GFAPP14136 432 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 CPN2P22792 545 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 HPDP32754 393 aaPredicted RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 STX2P32856 288 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 SOX3P41225 446 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 MAGEA4P43358 317 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 PIK3CGP48736 1102 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 NR0B1P51843 470 aaKnown RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 IRF9Q00978 393 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 DLG1Q12959 904 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 RCN2Q14257 317 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 AP5B1Q2VPB7 878 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 ZNF750Q32MQ0 723 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 PAGE2BQ5JRK9 111 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 MROH9Q5TGP6 573 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 MED27Q6P2C8 311 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 ABHD17CQ6PCB6 329 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 XKRXQ6PP77 449 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 ZNF793Q6ZN11 406 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 LRRC70Q7Z2Q7 622 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 ZNF227Q86WZ6 799 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 SIAH3Q8IW03 269 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 ZNF595Q8IYB9 648 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 PDPRQ8NCN5 879 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 STAG3L4Q8TBR4 150 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 KCTD4Q8WVF5 259 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 KIAA1191Q96A73 305 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 NXNL1Q96CM4 212 aa6.79□□□□□ -1.32
SPG11-213ENST00000558988 MTERF1Q99551 399 aaKnown RBP6.79□□□□□ -1.32
SPG11-213ENST00000558988 MAPKAP1Q9BPZ7 522 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms