RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 EID3Q8N140 333 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 ADCY4Q8NFM4 1077 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 OR10Q1Q8NGQ4 319 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 SPPL2AQ8TCT8 520 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 IFT81Q8WYA0 676 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 REPS1Q96D71 796 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 FMO2Q99518 471 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 SERPINI1Q99574 410 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 CENPKQ9BS16 269 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 ITPAQ9BY32 194 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 OR10A5Q9H207 317 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 UBQLN3Q9H347 655 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 LDAHQ9H6V9 325 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 ANKRA2Q9H9E1 313 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 ALKBH4Q9NXW9 302 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 MAT2BQ9NZL9 334 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 HEY2Q9UBP5 337 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 ACAD8Q9UKU7 415 aa12.42□□□□□ -0.42
VPS18-203ENST00000558855 TNPO3Q9Y5L0 923 aaKnown RBP12.42□□□□□ -0.42
VPS18-203ENST00000558855 C2orf92A0A1B0GVN3 265 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 C2orf72A6NCS6 295 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 OR6C76A6NM76 312 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 FIGNL2A6NMB9 653 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 C17orf51A8MQB3 221 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 HCN1O60741 890 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 CBX7O95931 251 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 INHBAP08476 426 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 HOXD4P09016 255 aaPredicted RBP12.41□□□□□ -0.42
VPS18-203ENST00000558855 CPMP14384 443 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 NT5EP21589 574 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 GDF1P27539 372 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 PIK3R1P27986 724 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 FEN1P39748 380 aaKnown RBP12.41□□□□□ -0.42
VPS18-203ENST00000558855 XKP51811 444 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 PHEXP78562 749 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 CRYZQ08257 329 aaKnown RBP12.41□□□□□ -0.42
VPS18-203ENST00000558855 WHAMMP3Q1A5X7 153 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 PRSS53Q2L4Q9 553 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 PRICKLE4Q2TBC4 344 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 UNC50Q53HI1 259 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 SLC48A1Q6P1K1 146 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 METTL2BQ6P1Q9 378 aaKnown RBP12.41□□□□□ -0.42
VPS18-203ENST00000558855 PLXDC2Q6UX71 529 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 ACAD11Q709F0 780 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 OR4K14Q8NGD5 310 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 NEIL3Q8TAT5 605 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 CHTF18Q8WVB6 975 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 DIO2Q92813 273 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 ATP6V1E2Q96A05 226 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 TM4SF18Q96CE8 201 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 RILPQ96NA2 401 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 TMEM237Q96Q45 408 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 NODALQ96S42 347 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 PELOQ9BRX2 385 aaKnown RBP12.41□□□□□ -0.42
VPS18-203ENST00000558855 DOHHQ9BU89 302 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 EXO5Q9H790 373 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 KCNJ16Q9NPI9 418 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 CNIH4Q9P003 139 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 TMEM216Q9P0N5 145 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 ZNF639Q9UID6 485 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 BOKQ9UMX3 212 aaPredicted RBP12.41□□□□□ -0.42
VPS18-203ENST00000558855 SLC12A4Q9UP95 1085 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 SLC6A5Q9Y345 797 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 L3MBTL1Q9Y468 752 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 PCDHA9Q9Y5H5 950 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 NPFFR2Q9Y5X5 522 aa12.41□□□□□ -0.42
VPS18-203ENST00000558855 MED12LQ86YW9 2145 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 WDR1O75083 606 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 RBP1P09455 135 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 SERPINB3P29508 390 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 CASP3P42574 277 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 ZFP36L2P47974 494 aaKnown RBP12.4□□□□□ -0.42
VPS18-203ENST00000558855 RAE1P78406 368 aaKnown RBP12.4□□□□□ -0.42
VPS18-203ENST00000558855 RPS6KA2Q15349 733 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 TRMT12Q53H54 448 aaKnown RBP12.4□□□□□ -0.42
VPS18-203ENST00000558855 EIPR1Q53HC9 387 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 CCNYL2Q5T2Q4 361 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 WLSQ5T9L3 541 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 TTC19Q6DKK2 380 aaPredicted RBP12.4□□□□□ -0.42
VPS18-203ENST00000558855 MILR1Q7Z6M3 343 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 C1orf52Q8N6N3 182 aaKnown RBP12.4□□□□□ -0.42
VPS18-203ENST00000558855 LRRN4CLQ8ND94 238 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 TNIP2Q8NFZ5 429 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 TRPC4APQ8TEL6 797 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 ZNF592Q92610 1267 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 HGDQ93099 445 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 SARAFQ96BY9 339 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 CNRIP1Q96F85 164 aaPredicted RBP12.4□□□□□ -0.42
VPS18-203ENST00000558855 ZNF597Q96LX8 424 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 ZNF681Q96N22 645 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 GNRHR2Q96P88 292 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 C1QTNF3Q9BXJ4 246 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 ANGPTL4Q9BY76 406 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 MRPL46Q9H2W6 279 aaKnown RBP12.4□□□□□ -0.42
VPS18-203ENST00000558855 EPB41L4BQ9H329 900 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 LIME1Q9H400 295 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 WDR41Q9HAD4 459 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 ACKR4Q9NPB9 350 aa12.4□□□□□ -0.42
VPS18-203ENST00000558855 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS18-203ENST00000558855 EHD3Q9NZN3 535 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms