RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CNR1P21554 472 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 MAPK1P28482 360 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 FEN1P39748 380 aaKnown RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 ASMTP46597 345 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 TMED10P49755 219 aaKnown RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 DCAF7P61962 342 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PSPHP78330 225 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 RPP38P78345 283 aaKnown RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 ALDH6A1Q02252 535 aaKnown RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 SRSF11Q05519 484 aaKnown RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 KIAA0040Q15053 153 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 CEBPEQ15744 281 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PRICKLE4Q2TBC4 344 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 EIF2S3LQ2VIR3 472 aaKnown RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 UGT3A2Q3SY77 523 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 ZNF468Q5VIY5 522 aaPredicted RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 SLC22A10Q63ZE4 541 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 KANK2Q63ZY3 851 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 CLEC6AQ6EIG7 209 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PAOXQ6QHF9 649 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 DGAT2L6Q6ZPD8 337 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 RTL4Q6ZR62 310 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 RGS9BPQ6ZS82 235 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 Q6ZSR9 355 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 SULF2Q8IWU5 870 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 CCDC116Q8IYX3 515 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 VWA5B2Q8N398 1253 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 ZNF321PQ8N8H1 164 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PSD4Q8NDX1 1056 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 OR6Y1Q8NGX8 325 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 C16orf52Q8NHV5 167 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.85□□□□□ -1.15
TPM1-213ENST00000558400 UCN3Q969E3 161 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 CTHRC1Q96CG8 243 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PPP3R2Q96LZ3 170 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 ZNF681Q96N22 645 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 BBS4Q96RK4 519 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 MECRQ9BV79 373 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 BRINP2Q9C0B6 783 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 OR10A5Q9H207 317 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 LIN28AQ9H9Z2 209 aaKnown RBP7.85□□□□□ -1.15
TPM1-213ENST00000558400 LRTM1Q9HBL6 345 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 MYNNQ9NPC7 610 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 MIEF1Q9NQG6 463 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 SACM1LQ9NTJ5 587 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 CNIH4Q9P003 139 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 SEC14L3Q9UDX4 400 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 PRODH2Q9UF12 536 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 ENTPD4Q9Y227 616 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 CCL27Q9Y4X3 112 aa7.85□□□□□ -1.15
TPM1-213ENST00000558400 FBN2P35556 2912 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 ITPR3Q14573 2671 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 A0A1B0GUH1 482 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 TP53I11O14683 189 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 ASNA1O43681 348 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 OR6B1O95007 311 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 AGFG2O95081 481 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 HSPA4LO95757 839 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 P04436 131 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 CHRNGP07510 517 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 LINC00032P0C843 101 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 DHRS4L1P0CG22 281 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 S1PR1P21453 382 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 RPL3P39023 403 aaKnown RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 SOX3P41225 446 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 CASP6P55212 293 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 PER3P56645 1201 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 MAD2L1Q13257 205 aaPredicted RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 MRPL49Q13405 166 aaKnown RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 CHI3L2Q15782 390 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 SMU1Q2TAY7 513 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 ZNF791Q3KP31 576 aaPredicted RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 SH2D4BQ5SQS7 431 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 HHATQ5VTY9 493 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 HIST2H2BCQ6DN03 193 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 FAM71E1Q6IPT2 247 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 GFRALQ6UXV0 394 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 GK5Q6ZS86 529 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 MDGA2Q7Z553 956 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 R3HCC1LQ7Z5L2 792 aaKnown RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 ZNF227Q86WZ6 799 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 TRIM42Q8IWZ5 723 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 C9orf40Q8IXQ3 194 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 DDIASQ8IXT1 998 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 NATD1Q8N6N6 113 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 ZNF615Q8N8J6 731 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 ZFP62Q8NB50 900 aaPredicted RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 ZNF675Q8TD23 568 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 TWIST2Q8WVJ9 160 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 EXOSC8Q96B26 276 aaKnown RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 MTERF3Q96E29 417 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 HSPBAP1Q96EW2 488 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 CNRIP1Q96F85 164 aaPredicted RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 ZNF764Q96H86 408 aaPredicted RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 SECISBP2Q96T21 854 aaKnown RBP7.84□□□□□ -1.15
TPM1-213ENST00000558400 FAM173AQ9BQD7 235 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 WWTR1Q9GZV5 400 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 TNFRSF12AQ9NP84 129 aa7.84□□□□□ -1.15
TPM1-213ENST00000558400 ARGLU1Q9NWB6 273 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms