RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KCNK10P57789 538 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 PHC1P78364 1004 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 FUT7Q11130 342 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 UBAP2LQ14157 1087 aaKnown RBP19.79■□□□□ 0.76
CASC4-204ENST00000557945 EXOSC7Q15024 291 aaKnown RBP19.79■□□□□ 0.76
CASC4-204ENST00000557945 TIGD2Q4W5G0 525 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 HSDL2Q6YN16 418 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 MTERF4Q7Z6M4 381 aaKnown RBP19.79■□□□□ 0.76
CASC4-204ENST00000557945 CLECL1Q8IZS7 167 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 OR7G1Q8NGA0 311 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 BRIX1Q8TDN6 353 aaKnown RBP19.79■□□□□ 0.76
CASC4-204ENST00000557945 ELP5Q8TE02 316 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 DEFB126Q9BYW3 111 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 ANKRA2Q9H9E1 313 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.79■□□□□ 0.76
CASC4-204ENST00000557945 FAM120CQ9NX05 1096 aaKnown RBP19.79■□□□□ 0.76
CASC4-204ENST00000557945 PCDHGB4Q9UN71 923 aa19.79■□□□□ 0.76
CASC4-204ENST00000557945 PRSS51A0A1B0GVH4 220 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 RNASET2O00584 256 aaKnown RBP19.78■□□□□ 0.76
CASC4-204ENST00000557945 CCDC22O60826 627 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 SLITRK5O94991 958 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 CPSF4O95639 269 aaKnown RBP19.78■□□□□ 0.76
CASC4-204ENST00000557945 ITGB2P05107 769 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 ZFP36L2P47974 494 aaKnown RBP19.78■□□□□ 0.76
CASC4-204ENST00000557945 MLC1Q15049 377 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 JMJD6Q6NYC1 403 aaPredicted RBP19.78■□□□□ 0.76
CASC4-204ENST00000557945 FUNDC1Q8IVP5 155 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 SIRT6Q8N6T7 355 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 OR7G2Q8NG99 324 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 OR52R1Q8NGF1 315 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 OR4A15Q8NGL6 344 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 VPS33AQ96AX1 596 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 CTHRC1Q96CG8 243 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 ELP4Q96EB1 424 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 SEMA4CQ9C0C4 833 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 NMUR2Q9GZQ4 415 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 OR10A5Q9H207 317 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 MRGBPQ9NV56 204 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 DDX18Q9NVP1 670 aaKnown RBP19.78■□□□□ 0.76
CASC4-204ENST00000557945 ZNF223Q9UK11 482 aaPredicted RBP19.78■□□□□ 0.76
CASC4-204ENST00000557945 ARL2BPQ9Y2Y0 163 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 SNX8Q9Y5X2 465 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 LAMA5O15230 3695 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 MED13Q9UHV7 2174 aa19.78■□□□□ 0.76
CASC4-204ENST00000557945 CCDC154A6NI56 674 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 ZFAND5O76080 213 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 CBX7O95931 251 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 S1PR1P21453 382 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 SOX18P35713 384 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 GKAP1Q5VSY0 366 aaPredicted RBP19.77■□□□□ 0.76
CASC4-204ENST00000557945 BLOC1S3Q6QNY0 202 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 SZRD1Q7Z422 152 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 SIMC1Q8NDZ2 872 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 THAP3Q8WTV1 239 aaPredicted RBP19.77■□□□□ 0.76
CASC4-204ENST00000557945 TMEM45AQ9NWC5 275 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 GPR83Q9NYM4 423 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 PTGFRNQ9P2B2 879 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 ZNF639Q9UID6 485 aa19.77■□□□□ 0.76
CASC4-204ENST00000557945 PLOD2O00469 737 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 FCHO1O14526 889 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 PLOD3O60568 738 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 SCN2BO60939 215 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 BCAS2O75934 225 aaPredicted RBP19.76■□□□□ 0.75
CASC4-204ENST00000557945 CLPSP04118 112 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 SOAT1P35610 550 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 SLC37A1P57057 533 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 HBA1P69905 142 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 RCAN2Q14206 197 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 MYBPC3Q14896 1274 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 SPDYE7PQ495Y7 208 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 VPS26BQ4G0F5 336 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 GK5Q6ZS86 529 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 SLC29A4Q7RTT9 530 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 MTDHQ86UE4 582 aaKnown RBP19.76■□□□□ 0.75
CASC4-204ENST00000557945 SLC5A8Q8N695 610 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 ZNF615Q8N8J6 731 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 FDCSPQ8NFU4 85 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 ERP27Q96DN0 273 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 SPDL1Q96EA4 605 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 ARHGAP9Q9BRR9 750 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 RMND5AQ9H871 391 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 C3orf14Q9HBI5 128 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 NEUROD4Q9HD90 331 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 ARMCX1Q9P291 453 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 BTNL2Q9UIR0 455 aa19.76■□□□□ 0.75
CASC4-204ENST00000557945 PKD1L2Q7Z442 2459 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 A0A087WV62 115 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 OR6C76A6NM76 312 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 UPK1AO00322 258 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 PRKNO60260 465 aaPredicted RBP19.75■□□□□ 0.75
CASC4-204ENST00000557945 PRAMEF2O60811 474 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 CD1EP15812 388 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 PRKAG1P54619 331 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 POLE2P56282 527 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 SOX8P57073 446 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 RNF4P78317 190 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 KLF10Q13118 480 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 DUSP8Q13202 625 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 MAPKAPK3Q16644 382 aa19.75■□□□□ 0.75
CASC4-204ENST00000557945 FHL5Q5TD97 284 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms