RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 FCHO1O14526 889 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 NME6O75414 186 aaPredicted RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 ITGA10O75578 1167 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 OR2J2O76002 312 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 ALDOCP09972 364 aaKnown RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 S1PR1P21453 382 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 MPIP34949 423 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 SOX18P35713 384 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 GUCY1A3Q02108 690 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 OC90Q02509 493 aaPredicted RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 FUT7Q11130 342 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 MAP4K2Q12851 820 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 DUSP8Q13202 625 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 TUBA3CQ13748 450 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 CEBPEQ15744 281 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 PLEKHN1Q494U1 663 aaPredicted RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 TRMT12Q53H54 448 aaKnown RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 TUBA3EQ6PEY2 450 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 TMEM107Q6UX40 140 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 RGS9BPQ6ZS82 235 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 SLC29A4Q7RTT9 530 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 ZNF551Q7Z340 670 aaPredicted RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 R3HCC1LQ7Z5L2 792 aaKnown RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 LGI4Q8N135 537 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 ZNF615Q8N8J6 731 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 OR7G1Q8NGA0 311 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 OR52R1Q8NGF1 315 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 OR5L2Q8NGL0 311 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 MARK4Q96L34 752 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 AMDHD1Q96NU7 426 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 UTP23Q9BRU9 249 aaKnown RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 MYOTQ9UBF9 498 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 ATP6V1HQ9UI12 483 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 B3GNT3Q9Y2A9 372 aa13.3□□□□□ -0.28
USP3-205ENST00000557884 HEMK1Q9Y5R4 338 aaPredicted RBP13.3□□□□□ -0.28
USP3-205ENST00000557884 TNRC6AQ8NDV7 1962 aaKnown RBP13.29□□□□□ -0.28
USP3-205ENST00000557884 OR5H15A6NDH6 313 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 TBX19O60806 448 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 CBX7O95931 251 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 LAMP1P11279 417 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 PRPS1L1P21108 318 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 CD96P40200 585 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 MC3RP41968 323 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 TNFSF10P50591 281 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 SSR4P51571 173 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 AQP5P55064 265 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 CLDN8P56748 225 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 HSPB3Q12988 150 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 EBPQ15125 230 aaKnown RBP13.29□□□□□ -0.28
USP3-205ENST00000557884 OR1C1Q15619 314 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 CPTPQ5TA50 214 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 TMEM198Q66K66 360 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 OGFOD2Q6N063 350 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 EPGNQ6UW88 154 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 Q6ZS92 163 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 PRICKLE2Q7Z3G6 844 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 SPATA19Q7Z5L4 167 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 RIMKLAQ8IXN7 391 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 TMEM156Q8N614 296 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 OR7G2Q8NG99 324 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 OR8K3Q8NH51 312 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 C16orf52Q8NHV5 167 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 ZNF675Q8TD23 568 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 HAS2Q92819 552 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 PNPLA2Q96AD5 504 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 MTERF3Q96E29 417 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 MAGED4Q96JG8 741 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 SIGLEC12Q96PQ1 595 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 DPY30Q9C005 99 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 RNF32Q9H0A6 362 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 AIG1Q9NVV5 245 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 ZNF639Q9UID6 485 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 DTX4Q9Y2E6 619 aa13.29□□□□□ -0.28
USP3-205ENST00000557884 OR6C76A6NM76 312 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 C9JVG2 144 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 RPL3P39023 403 aaKnown RBP13.28□□□□□ -0.28
USP3-205ENST00000557884 CASRP41180 1078 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 IDH3AP50213 366 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 MANFP55145 182 aaKnown RBP13.28□□□□□ -0.28
USP3-205ENST00000557884 ZNF169Q14929 603 aaPredicted RBP13.28□□□□□ -0.28
USP3-205ENST00000557884 TLR1Q15399 786 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 NNATQ16517 81 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 PGS1Q32NB8 556 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 LSM12Q3MHD2 195 aaKnown RBP13.28□□□□□ -0.28
USP3-205ENST00000557884 HLA-DQA1Q5Y7H0 255 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 SPINK14Q6IE38 97 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 ACAD11Q709F0 780 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 LRRC34Q8IZ02 419 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 ARMC10Q8N2F6 343 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 Q8NA96 180 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 NUBPLQ8TB37 319 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 ASB15Q8WXK1 588 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 CTHRC1Q96CG8 243 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 ZBED6CLQ96FA7 236 aaPredicted RBP13.28□□□□□ -0.28
USP3-205ENST00000557884 ZNF764Q96H86 408 aaPredicted RBP13.28□□□□□ -0.28
USP3-205ENST00000557884 MAELQ96JY0 434 aaKnown RBP13.28□□□□□ -0.28
USP3-205ENST00000557884 RASL10BQ96S79 203 aa13.28□□□□□ -0.28
USP3-205ENST00000557884 EBF4Q9BQW3 602 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms