RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 INTS1Q8N201 2190 aaKnown RBP13.45□□□□□ -0.26
SHMT2-235ENST00000557740 C15orf38-AP3S2A0A0A6YYH1 394 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 ANKRD33BA6NCL7 494 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 POC1B-GALNT4F8VUJ3 575 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 RPS17P08708 135 aaKnown RBP13.44□□□□□ -0.26
SHMT2-235ENST00000557740 CPMP14384 443 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 DEKP35659 375 aaKnown RBP13.44□□□□□ -0.26
SHMT2-235ENST00000557740 MASP1P48740 699 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 FBXW4P57775 412 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 FUT7Q11130 342 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 SLC25A35Q3KQZ1 300 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 WDR53Q7Z5U6 358 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-235ENST00000557740 TMEM200AQ86VY9 491 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 MMGT1Q8N4V1 131 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 OR4F6Q8NGB9 312 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 ZNF592Q92610 1267 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 TP53INP1Q96A56 240 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 RILPQ96NA2 401 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 OR10A5Q9H207 317 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 PROK2Q9HC23 129 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 KCNN3Q9UGI6 736 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 DMGDHQ9UI17 866 aaKnown RBP13.44□□□□□ -0.26
SHMT2-235ENST00000557740 ZNF180Q9UJW8 692 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 SNX6Q9UNH7 406 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 NPFFR2Q9Y5X5 522 aa13.44□□□□□ -0.26
SHMT2-235ENST00000557740 ANKRD17O75179 2603 aaKnown RBP13.44□□□□□ -0.26
SHMT2-235ENST00000557740 A0A087WUV0 522 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 TRIM3O75382 744 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 CT62P0C5K7 136 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 PORP16435 677 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 ADH7P40394 386 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 RIPPLY2Q5TAB7 128 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 BICRALQ6AI39 1079 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 RPS27LQ71UM5 84 aaKnown RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 PACS2Q86VP3 889 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 ULK2Q8IYT8 1036 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 PRR22Q8IZ63 422 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 VWA5B2Q8N398 1253 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 METTL4Q8N3J2 472 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 NOA1Q8NC60 698 aaKnown RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 C17orf47Q8NEP4 570 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 OR7G1Q8NGA0 311 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 UHMK1Q8TAS1 419 aaKnown RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 SPPL2AQ8TCT8 520 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 ZNF483Q8TF39 744 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 DCAKDQ8WVC6 231 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 SELENOMQ8WWX9 145 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 SECISBP2Q96T21 854 aaKnown RBP13.43□□□□□ -0.26
SHMT2-235ENST00000557740 NMRK1Q9NWW6 199 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 PCDHA9Q9Y5H5 950 aa13.43□□□□□ -0.26
SHMT2-235ENST00000557740 SPG11Q96JI7 2443 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 CSMD2Q7Z408 3487 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 EXOC1LA0A1B0GW35 172 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 C1orf226A1L170 272 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 A8MT66 165 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 ERAL1O75616 437 aaKnown RBP13.42□□□□□ -0.26
SHMT2-235ENST00000557740 TRAPPC6AO75865 159 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 SNX4O95219 450 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 ZWINTO95229 277 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 CTAGE8P0CG41 777 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 TSPAN8P19075 237 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 GPX3P22352 226 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 TEX35Q5T0J7 233 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 CES4AQ5XG92 561 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 SLC48A1Q6P1K1 146 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 LETMD1Q6P1Q0 360 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 CTAGE4Q8IX94 777 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 ZNF615Q8N8J6 731 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 TRPC4APQ8TEL6 797 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 KLHL29Q96CT2 875 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 FAIM2Q9BWQ8 316 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 BRINP2Q9C0B6 783 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 BRF2Q9HAW0 419 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 FARSBQ9NSD9 589 aaKnown RBP13.42□□□□□ -0.26
SHMT2-235ENST00000557740 CFL2Q9Y281 166 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 PCDHGB3Q9Y5G1 929 aa13.42□□□□□ -0.26
SHMT2-235ENST00000557740 PHF3Q92576 2039 aaKnown RBP13.42□□□□□ -0.26
SHMT2-235ENST00000557740 A0A1B0GTL3 188 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 HSPB2A8KAH6 182 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 PDYNP01213 254 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 ATP1B1P05026 303 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 SNRPAP09012 282 aaKnown RBP13.41□□□□□ -0.26
SHMT2-235ENST00000557740 TAC1P20366 129 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 ABCD3P28288 659 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 FEN1P39748 380 aaKnown RBP13.41□□□□□ -0.26
SHMT2-235ENST00000557740 CDH13P55290 713 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 GALNT1Q10472 559 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-235ENST00000557740 DUSP8Q13202 625 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 TOMM20Q15388 145 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 HSPB2Q16082 182 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 NNATQ16517 81 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 GLE1Q53GS7 698 aaKnown RBP13.41□□□□□ -0.26
SHMT2-235ENST00000557740 LGSNQ5TDP6 509 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 LIX1LQ8IVB5 337 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 ADIPOR1Q96A54 375 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 HBEGFQ99075 208 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 ANGPTL4Q9BY76 406 aa13.41□□□□□ -0.26
SHMT2-235ENST00000557740 NXF5Q9H1B4 397 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms