RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 CCDC71Q8IV32 467 aaPredicted RBP3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 ABHD12Q8N2K0 398 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 RNF148Q8N7C7 305 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 C4orf32Q8N8J7 132 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 MLKLQ8NB16 471 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 BEST4Q8NFU0 473 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 DQX1Q8TE96 717 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 C19orf43Q9BQ61 176 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 LRRCC1Q9C099 1032 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 RAB17Q9H0T7 212 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 HEXA-AS1Q9H8Q6 139 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 JPT2Q9H910 190 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 EIF3KQ9UBQ5 218 aaKnown RBP3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 CLIP2Q9UDT6 1046 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 MIOXQ9UGB7 285 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 PLA2G4CQ9UP65 541 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 KLHDC2Q9Y2U9 406 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 FBXO7Q9Y3I1 522 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 CLCA3PQ9Y6N3 262 aa3.53□□□□□ -1.84
EFCAB11-213ENST00000557685 NPIPA5A0A0B4J1W7 369 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 A0A1W2PPR1 153 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 C19orf81C9J6K1 198 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 NPIPA5E9PKD4 350 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 HPRP00739 348 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 SERPINB2P05120 415 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CCDC159P0C7I6 412 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 OR9G9P0C7N8 305 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 GHRP10912 638 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 RALAP11233 206 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 DNAJB1P25685 340 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CALML3P27482 149 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 PRDX6P30041 224 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CCND2P30279 289 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 HSPA1LP34931 641 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 MS4A2Q01362 244 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 ACY1Q03154 408 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 GABPB1Q06547 395 aaPredicted RBP3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CD300CQ08708 224 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 FCHO2Q0JRZ9 810 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 ANKRD55Q3KP44 614 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 TTC31Q49AM3 519 aaPredicted RBP3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 UNC50Q53HI1 259 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 TCHHL1Q5QJ38 904 aaPredicted RBP3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 C9orf66Q5T8R8 295 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 LIPKQ5VXJ0 399 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 PAQR6Q6TCH4 344 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 DPY19L2P2Q6ZN68 376 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 RANBP3LQ86VV4 465 aaPredicted RBP3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 MAPK1IP1LQ8NDC0 245 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CCDC51Q96ER9 411 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 ZNF597Q96LX8 424 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CPXM1Q96SM3 734 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CCDC28BQ9BUN5 200 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 NLNQ9BYT8 704 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 TMEM231Q9H6L2 316 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 ELL3Q9HB65 397 aaPredicted RBP3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 ACTR3BQ9P1U1 418 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 IL20RAQ9UHF4 553 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 BCAP29Q9UHQ4 241 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CPQQ9Y646 472 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CUX2O14529 1486 aa3.52□□□□□ -1.85
EFCAB11-213ENST00000557685 CYB561D2O14569 222 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 CFLARO15519 480 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 B3GALNT1O75752 331 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 PPP2R1BP30154 601 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 ETV5P41161 510 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 SLC26A5P58743 744 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 GMFBP60983 142 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 GSTO1P78417 241 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 SPP2Q13103 211 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 KARSQ15046 597 aaKnown RBP3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 SNAI3Q3KNW1 292 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 ACSF3Q4G176 576 aaPredicted RBP3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 RAET1GQ6H3X3 334 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 IRGCQ6NXR0 463 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 EMBQ6PCB8 327 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 TMUB2Q71RG4 321 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 GOLGA7Q7Z5G4 137 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 VPS36Q86VN1 386 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 AMZ2Q86W34 360 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 PYROXD2Q8N2H3 581 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 Q8N377 158 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 CSNK1G2-AS1Q8NCQ2 148 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 OR56B1Q8NGI3 324 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 NCLNQ969V3 563 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 RBM24Q9BX46 236 aaKnown RBP3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 LIME1Q9H400 295 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 NRN1Q9NPD7 142 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 SOHLH2Q9NX45 425 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 SEC14L4Q9UDX3 406 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 EMCNQ9ULC0 261 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 NCAPD2Q15021 1401 aa3.51□□□□□ -1.85
EFCAB11-213ENST00000557685 GON4LQ3T8J9 2241 aa3.5□□□□□ -1.85
EFCAB11-213ENST00000557685 TEX48A0A1B0GUV7 120 aa3.5□□□□□ -1.85
EFCAB11-213ENST00000557685 RPL37AP8A6NKH3 93 aa3.5□□□□□ -1.85
EFCAB11-213ENST00000557685 K7ERI5 159 aa3.5□□□□□ -1.85
EFCAB11-213ENST00000557685 EI24O14681 340 aa3.5□□□□□ -1.85
EFCAB11-213ENST00000557685 ADAM12O43184 909 aa3.5□□□□□ -1.85
EFCAB11-213ENST00000557685 STK17BO94768 372 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms