RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 FAM174BQ3ZCQ3 159 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF385BQ569K4 471 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 ATP1A1-AS1Q5TC04 95 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 AGAP7PQ5VUJ5 663 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 SLC29A4Q7RTT9 530 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 DND1Q8IYX4 353 aaKnown RBP13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 TRIML2Q8N7C3 387 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 SFXN5Q8TD22 340 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 TM9SF4Q92544 642 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 UCN3Q969E3 161 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 NCLNQ969V3 563 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF354BQ96LW1 612 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 AGAP4Q96P64 663 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 LMF1Q96S06 567 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 DEFB126Q9BYW3 111 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 GPR83Q9NYM4 423 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 TAS2R9Q9NYW1 312 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 ABI3Q9P2A4 366 aa13.14□□□□□ -0.31
SUPT16H-208ENST00000557652 SPTA1P02549 2419 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 EXPH5Q8NEV8 1989 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 IGHV3-20A0A0C4DH32 117 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 A8MUA0 341 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 KRT16P08779 473 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 GPC1P35052 558 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 PGDP52209 483 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 SLC37A1P57057 533 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 MGAT2Q10469 447 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 MEP1AQ16819 746 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 MPEG1Q2M385 716 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 PGS1Q32NB8 556 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 SPANXN4Q5MJ08 99 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 GKAP1Q5VSY0 366 aaPredicted RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 OR2L13Q8N349 312 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 SLC15A4Q8N697 577 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 ANKS4BQ8N8V4 417 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 LSM14AQ8ND56 463 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 OR9A2Q8NGT5 310 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 GOT1L1Q8NHS2 421 aaPredicted RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 TP53INP1Q96A56 240 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 PPWD1Q96BP3 646 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 ELP4Q96EB1 424 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 THOC1Q96FV9 657 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 THOC3Q96J01 351 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 CCDC115Q96NT0 180 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 SMAD5Q99717 465 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 ELAC2Q9BQ52 826 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 CNPPD1Q9BV87 410 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 OR10A5Q9H207 317 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 C19orf53Q9UNZ5 99 aaPredicted RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 ERVK-19Q9WJR5 959 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 ARL2BPQ9Y2Y0 163 aa13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 DSPP15924 2871 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-208ENST00000557652 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 CELSR3Q9NYQ7 3312 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 FCHO1O14526 889 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 EMC8O43402 210 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 SCN2BO60939 215 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 S1PR1P21453 382 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 SOX11P35716 441 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 TRPC1P48995 793 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 RNF4P78317 190 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 Q0VFX4 171 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 COQ5Q5HYK3 327 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 OR4F3Q6IEY1 312 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 TCTN3Q6NUS6 607 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 ISLR2Q6UXK2 745 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 GPALPP1Q8IXQ4 340 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF615Q8N8J6 731 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 OR56A1Q8NGH5 318 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 CIDECQ96AQ7 238 aaPredicted RBP13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 OR52E6Q96RD3 313 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 SLC25A23Q9BV35 468 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 SLAMF7Q9NQ25 335 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 DDX18Q9NVP1 670 aaKnown RBP13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 ZNF451Q9Y4E5 1061 aa13.12□□□□□ -0.31
SUPT16H-208ENST00000557652 ZFHX4Q86UP3 3567 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 TRBV11-1A0A0K0K1C0 115 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 ACOX3O15254 700 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 DCTN3O75935 186 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 PSMG1O95456 288 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 CBX7O95931 251 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 ZCCHC18P0CG32 403 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 ITGAMP11215 1152 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 IL12AP29459 219 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 CCL11P51671 97 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 POLE2P56282 527 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 WNT3P56703 355 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 DUSP2Q05923 314 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 HSPB3Q12988 150 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 MAPKAPK3Q16644 382 aa13.11□□□□□ -0.31
SUPT16H-208ENST00000557652 PRSS53Q2L4Q9 553 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms