RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ADCY5O95622 1261 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CLPTM1O96005 669 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CRYAAP02489 173 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 RPLP0P05388 317 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 FCER2P06734 321 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 GSTT2P0CG29 244 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 GSTT2BP0CG30 244 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 AMD1P17707 334 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CALB2P22676 271 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 HOXD10P28358 340 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CYLC1P35663 651 aaPredicted RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 HTR5AP47898 357 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ACADVLP49748 655 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ABCE1P61221 599 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 RPL27P61353 136 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 PPIAP62937 165 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CSNK2BP67870 215 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 SRYQ05066 204 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ILF3Q12906 894 aaKnown RBP eCLIP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 DDX39BQ13838 428 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 EFTUD2Q15029 972 aaKnown RBP eCLIP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZMYND11Q15326 602 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 PPP1R7Q15435 360 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 SHROOM1Q2M3G4 852 aaPredicted RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 PARP6Q2NL67 630 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 HKDC1Q2TB90 917 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF699Q32M78 642 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ACSF3Q4G176 576 aaPredicted RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 RFTN2Q52LD8 501 aaPredicted RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 TCHHL1Q5QJ38 904 aaPredicted RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 DDI2Q5TDH0 399 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 C1orf189Q5VU69 101 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 NEPROQ6NW34 567 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ARHGAP11AQ6P4F7 1023 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF790Q6PG37 636 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZYG11AQ6WRX3 759 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF841Q6ZN19 808 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 C9orf139Q6ZV77 190 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 LRRC70Q7Z2Q7 622 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 P4HA3Q7Z4N8 544 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 C1QL2Q7Z5L3 287 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 RBM23Q86U06 439 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 EFCAB13Q8IY85 973 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 SLC22A15Q8IZD6 547 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 DDHD1Q8NEL9 900 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 OR4D10Q8NGI6 311 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 OR13C2Q8NGS9 318 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 LMO3Q8TAP4 145 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ATP8B4Q8TF62 1192 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZNRF4Q8WWF5 429 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 LIPHQ8WWY8 451 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 SLC25A36Q96CQ1 311 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 GIMAP5Q96F15 307 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF486Q96H40 463 aaPredicted RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 SENP8Q96LD8 212 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZBTB18Q99592 522 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CCT7Q99832 543 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 TBCDQ9BTW9 1192 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 RAB11FIP5Q9BXF6 653 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 GON7Q9BXV9 100 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CAPS2Q9BXY5 557 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 GCOM2Q9BZD3 368 aaPredicted RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CLSTN2Q9H4D0 955 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 NMRK1Q9NWW6 199 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 ZMAT5Q9UDW3 170 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 FZR1Q9UM11 496 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 CLEC4AQ9UMR7 237 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 MRPS33Q9Y291 106 aaKnown RBP2.73□□□□□ -1.97
TRAV28-201ENST00000557548 TMED5Q9Y3A6 229 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 FKBP7Q9Y680 259 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 PTPRUQ92729 1446 aa2.73□□□□□ -1.97
TRAV28-201ENST00000557548 FGD5Q6ZNL6 1462 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 GREB1LQ9C091 1923 aaPredicted RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 LOC390937A0A1W2PQ73 354 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 OR5H15A6NDH6 313 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 MSGN1A6NI15 193 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 ASB14A6NK59 587 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 LRRC30A6NM36 301 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 TMCO5BA8MYB1 307 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 WASH3PC4AMC7 463 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 H0YL77 283 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 M0QX08 132 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 SURF4O15260 269 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CFLARO15519 480 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 SMAD6O43541 496 aaKnown RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 SDC3O75056 442 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 SURF6O75683 361 aaKnown RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 NEBLO76041 1014 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 NXPH2O95156 264 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 PAK4O96013 591 aaPredicted RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 IL1BP01584 269 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CHRNA1P02708 482 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 MT-ND1P03886 318 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 F7P08709 466 aaPredicted RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 NEFHP12036 1026 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 GZMAP12544 262 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 PAX1P15863 534 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 MAT2AP31153 395 aaKnown RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 RFC2P35250 354 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CHI3L1P36222 383 aaPredicted RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms