RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SPATA3Q8NHX4 192 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 EEF1AKMT1Q8WVE0 214 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 RNASE6Q93091 150 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SARAFQ96BY9 339 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SNF8Q96H20 258 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 TSNARE1Q96NA8 513 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 TACO1Q9BSH4 297 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 HAUS8Q9BT25 410 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 LDAHQ9H6V9 325 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 EXO5Q9H790 373 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 CLK4Q9HAZ1 481 aaKnown RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 PARVBQ9HBI1 364 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 SEMA4BQ9NPR2 832 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 TUBA8Q9NY65 449 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 ZFP69BQ9UJL9 534 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 GPR55Q9Y2T6 319 aaPredicted RBP5.39□□□□□ -1.55
VPS33B-207ENST00000557470 MMACHCQ9Y4U1 282 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 RTTNQ86VV8 2226 aa5.39□□□□□ -1.55
VPS33B-207ENST00000557470 MPDZO75970 2070 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TRGV5A0A0B4J1U4 118 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 A0A0G2JN53 185 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ZCWPW2A0A1B0GU75 182 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 MYOCOSA0A1B0GUC4 107 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 A0A1W2PPH5 198 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 A0A1W2PPR1 153 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TUBAL3A6NHL2 446 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CLCA1A8K7I4 914 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 FAM171A2A8MVW0 826 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 DVL2O14641 736 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SHOXO15266 292 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 HCN1O60741 890 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF354AO60765 605 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 HAUS5O94927 633 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 P04436 131 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 RFPL3SP0C7P2 107 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SMIM10L1P0DMW3 83 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 OSMP13725 252 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 GABRA1P14867 456 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TPSB2P20231 275 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 AHRP35869 848 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 PIGAP37287 484 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 MTNR1BP49286 362 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 HSD17B7P56937 341 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 BTN3A2P78410 334 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CDK16Q00536 496 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 REEP5Q00765 189 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 GALNT1Q10472 559 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SLC13A2Q13183 592 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 PMS2P11Q13670 270 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 THOC5Q13769 683 aaKnown RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 RUNX2Q13950 521 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 POU4F3Q15319 338 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SIX1Q15475 284 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TPSAB1Q15661 275 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 MPEG1Q2M385 716 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 FBXL19-AS1Q494R0 122 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ACSF3Q4G176 576 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TOR1AIP1Q5JTV8 583 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 Q5PR19 223 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SHEQ5VZ18 495 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 DUPD1Q68J44 220 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ANKRD34AQ69YU3 496 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 LRRC8EQ6NSJ5 796 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CASC4Q6P4E1 433 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 HSDL2Q6YN16 418 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 KIAA1328Q86T90 577 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CAND1Q86VP6 1230 aaKnown RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CXorf67Q86X51 503 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 PALM2Q8IXS6 379 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CIARTQ8N365 385 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 FBXW8Q8N3Y1 598 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TBC1D19Q8N5T2 526 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TEX9Q8N6V9 391 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF321PQ8N8H1 164 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 FAM47BQ8NA70 645 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TNIP2Q8NFZ5 429 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 OR56A3Q8NH54 315 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 LINC01560Q8TB33 94 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SLC5A11Q8WWX8 675 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 NEIL2Q969S2 332 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 FBXW5Q969U6 566 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 LRRC46Q96FV0 321 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SMIM10Q96HG1 83 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 MAELQ96JY0 434 aaKnown RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 COX4I2Q96KJ9 171 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CAPZA3Q96KX2 299 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 NDNQ99608 321 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 TSGA10Q9BZW7 698 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 OR8D2Q9GZM6 311 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SLC6A15Q9H2J7 730 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 KCNF1Q9H3M0 494 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF703Q9H7S9 590 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ADAP2Q9NPF8 381 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 PRTFDC1Q9NRG1 225 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 SACM1LQ9NTJ5 587 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 BEX4Q9NWD9 120 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ARL15Q9NXU5 204 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 MTRF1LQ9UGC7 380 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms