RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 IARS2Q9NSE4 1012 aaKnown RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 TMOD2Q9NZR1 351 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 CFAP45Q9UL16 551 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 ZNF346Q9UL40 294 aaKnown RBP2.96□□□□□ -1.94
VRK1-207ENST00000557352 AGTPBP1Q9UPW5 1226 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 CNTNAP1P78357 1384 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 UTRNP46939 3433 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 ZNF236Q9UL36 1845 aa2.96□□□□□ -1.94
VRK1-207ENST00000557352 TCP10L2B9ZVM9 353 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 LMO7DNF2Z398 122 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 RANBP6O60518 1105 aaKnown RBP2.95□□□□□ -1.94
VRK1-207ENST00000557352 JAK2O60674 1132 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 MMP1P03956 469 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 FYNP06241 537 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 APOA4P06727 396 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 HCKP08631 526 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 SUPT20HL2P0C7V6 817 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 ERCC2P18074 760 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 CPT2P23786 658 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 CALML3P27482 149 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 UBE2HP62256 183 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 GRB14Q14449 540 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 KYNUQ16719 465 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 TIMM50Q3ZCQ8 353 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 MUC21Q5SSG8 566 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 TEX35Q5T0J7 233 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 MARC1Q5VT66 337 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 ENPP7Q6UWV6 458 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 COX8CQ7Z4L0 72 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 APOBEC3FQ8IUX4 373 aaKnown RBP2.95□□□□□ -1.94
VRK1-207ENST00000557352 CCDC148Q8NFR7 591 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 OR1B1Q8NGR6 318 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 CCDC12Q8WUD4 166 aaPredicted RBP2.95□□□□□ -1.94
VRK1-207ENST00000557352 C8orf76Q96K31 380 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 ZNF396Q96N95 335 aaPredicted RBP2.95□□□□□ -1.94
VRK1-207ENST00000557352 ZNF558Q96NG5 402 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 ALKBH3Q96Q83 286 aaPredicted RBP2.95□□□□□ -1.94
VRK1-207ENST00000557352 LRRC2Q9BYS8 371 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 GLT8D2Q9H1C3 349 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 FZD8Q9H461 694 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 FN3KQ9H479 309 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 PDFQ9HBH1 243 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 MYOZ2Q9NPC6 264 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 PFDN4Q9NQP4 134 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 CUTCQ9NTM9 273 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 THYN1Q9P016 225 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 MAD2L2Q9UI95 211 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 SATB2Q9UPW6 733 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 ZSWIM8A7E2V4 1837 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 SRCAPQ6ZRS2 3230 aa2.95□□□□□ -1.94
VRK1-207ENST00000557352 SIP14410 1827 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 TRBV5-4A0A0C4DH59 114 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 H3BQV1 296 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 LAD1O00515 517 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 DKC1O60832 514 aaKnown RBP eCLIP2.94□□□□□ -1.94
VRK1-207ENST00000557352 ZNF253O75346 499 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 LETM1O95202 739 aaPredicted RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 ASNSP08243 561 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 CCDC175P0C221 793 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 UMPSP11172 480 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 PDHBP11177 359 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 SCG2P13521 617 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 MGMTP16455 207 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 GOT1P17174 413 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 ACAT1P24752 427 aaKnown RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 AKAP17AQ02040 695 aaKnown RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 ZRANB3Q5FWF4 1079 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 PAMR1Q6UXH9 720 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 RBM43Q6ZSC3 357 aaKnown RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 Q71RC1 249 aaPredicted RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 VASH2Q86V25 355 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 BANPQ8N9N5 519 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 OR6T1Q8NGN1 323 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 EXT2Q93063 718 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 SYAP1Q96A49 352 aaPredicted RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 PHYHIPLQ96FC7 376 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 DYNLL2Q96FJ2 89 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 RUNDC3BQ96NL0 473 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 TNFRSF13CQ96RJ3 184 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 SERINC2Q96SA4 455 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 PCDHB18PQ96TA0 734 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 BAG1Q99933 345 aaPredicted RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 AP1M1Q9BXS5 423 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 DEFB129Q9H1M3 183 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 TDRD3Q9H7E2 651 aaKnown RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 DHRS4-AS1Q9P1J3 65 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 NFKBIL1Q9UBC1 381 aaPredicted RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 MRPL11Q9Y3B7 192 aaKnown RBP2.94□□□□□ -1.94
VRK1-207ENST00000557352 SSC5DA1L4H1 1573 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 MYH10P35580 1976 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 TRIP11Q15643 1979 aa2.94□□□□□ -1.94
VRK1-207ENST00000557352 CITO14578 2027 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 PDCD11Q14690 1871 aaKnown RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 A0A1W2PPW3 197 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 VPS37CA5D8V6 355 aaPredicted RBP2.93□□□□□ -1.94
VRK1-207ENST00000557352 UBE2CO00762 179 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 CTAGE5O15320 804 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 CYTH3O43739 400 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 NMT2O60551 498 aa2.93□□□□□ -1.94
VRK1-207ENST00000557352 PRAF2O60831 178 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms