RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 GALNTL6Q49A17 601 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ATP6AP1LQ52LC2 224 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 RFTN2Q52LD8 501 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-209ENST00000557342 XKR7Q5GH72 579 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF324BQ6AW86 544 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-209ENST00000557342 IL20RBQ6UXL0 311 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 C16orf47Q6ZP98 133 aaPredicted RBP11.56□□□□□ -0.56
SLIRP-209ENST00000557342 RTL4Q6ZR62 310 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 HDXQ7Z353 690 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF227Q86WZ6 799 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 TICAM1Q8IUC6 712 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 CCDC116Q8IYX3 515 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 TAGAPQ8N103 731 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF615Q8N8J6 731 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 GOLM1Q8NBJ4 401 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 POGLUT1Q8NBL1 392 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 NR4A3Q92570 626 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ERP27Q96DN0 273 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 SGCZQ96LD1 299 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 BBS4Q96RK4 519 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 SLX1AQ9BQ83 275 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 HES7Q9BYE0 225 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 TAS2R7Q9NYW3 318 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 PRODH2Q9UF12 536 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 ESPL1Q14674 2120 aa11.56□□□□□ -0.56
SLIRP-209ENST00000557342 CAPN14A8MX76 684 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 ITM2AO43736 263 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 SKAP2O75563 359 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-209ENST00000557342 LYPLA1O75608 230 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-209ENST00000557342 SLITRK5O94991 958 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 OR6B1O95007 311 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 CLPSP04118 112 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 S1PR1P21453 382 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 NTSP30990 170 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 RPL14P50914 215 aaKnown RBP11.55□□□□□ -0.56
SLIRP-209ENST00000557342 NRG3P56975 720 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 DUSP2Q05923 314 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 MGAT2Q10469 447 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 MAD2L1Q13257 205 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-209ENST00000557342 FAM180BQ6P0A1 224 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 FAM111BQ6SJ93 734 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-209ENST00000557342 ZGRF1Q86YA3 2104 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 FAM9CQ8IZT9 166 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 GOLGA6L1Q8N7Z2 621 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF781Q8N8C0 355 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 PSD4Q8NDX1 1056 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 C17orf47Q8NEP4 570 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 ADCY4Q8NFM4 1077 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 RAB3IL1Q8TBN0 382 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 CTHRC1Q96CG8 243 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF764Q96H86 408 aaPredicted RBP11.55□□□□□ -0.56
SLIRP-209ENST00000557342 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 BCAP29Q9UHQ4 241 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF639Q9UID6 485 aa11.55□□□□□ -0.56
SLIRP-209ENST00000557342 MYO1GB0I1T2 1018 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 PEX1O43933 1283 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 PEX11AO75192 247 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 NADKO95544 446 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 P04436 131 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 SDC1P18827 310 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 TACR1P25103 407 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 UQCRFS1P47985 274 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 TMED10P49755 219 aaKnown RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 MEOX1P50221 254 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 NR0B1P51843 470 aaKnown RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 TDGF1P3P51864 188 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 DCAF7P61962 342 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 PMP22Q01453 160 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 ALDH6A1Q02252 535 aaKnown RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 LTB4RQ15722 352 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 SMU1Q2TAY7 513 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF628Q5EBL2 1059 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 FHL5Q5TD97 284 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 CES4AQ5XG92 561 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 ATG16L1Q676U5 607 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 MDGA2Q7Z553 956 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 R3HCC1LQ7Z5L2 792 aaKnown RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 SULF2Q8IWU5 870 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF441Q8N8Z8 693 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 OR52R1Q8NGF1 315 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 OR9A2Q8NGT5 310 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 C16orf52Q8NHV5 167 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 MGARPQ8TDB4 240 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 ADIPOR1Q96A54 375 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 TUBGCP3Q96CW5 907 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 MTERF3Q96E29 417 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 SPACA9Q96E40 222 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-209ENST00000557342 EGLN2Q96KS0 407 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 FRMD6Q96NE9 622 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 C20orf27Q9GZN8 174 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 REEP4Q9H6H4 257 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 SACM1LQ9NTJ5 587 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 HAO1Q9UJM8 370 aa11.54□□□□□ -0.56
SLIRP-209ENST00000557342 ATP6AP2A0A1C7CYW4 349 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF354AO60765 605 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms