RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SOX18P35713 384 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 PIK3CBP42338 1070 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 PLTPP55058 493 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 SRYQ05066 204 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 GTF2H2Q13888 395 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 KEAP1Q14145 624 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 SETDB1Q15047 1291 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 TRADDQ15628 312 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 MROH9Q5TGP6 573 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 FNDC7Q5VTL7 733 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 MRM1Q6IN84 353 aaKnown RBP13.51□□□□□ -0.25
CHD8-211ENST00000556833 FAM180BQ6P0A1 224 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 GTF2H2CQ6P1K8 395 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 ANGPTL8Q6UXH0 198 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 LUZP2Q86TE4 346 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 GALNT12Q8IXK2 581 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 ZNF441Q8N8Z8 693 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 C9orf106Q8NAJ2 232 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 LRRC46Q96FV0 321 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 METTL7AQ9H8H3 244 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 CXorf21Q9HAI6 301 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 GALNT9Q9HCQ5 603 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 MAPRE3Q9UPY8 281 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 C15orf41Q9Y2V0 281 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 PCDHGA11Q9Y5H2 935 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 FAM221AA4D161 298 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 OR6C76A6NM76 312 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 RAF1P04049 648 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 SLC35E2P0CK97 266 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 KRT15P19012 456 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 PTX3P26022 381 aaPredicted RBP13.5□□□□□ -0.25
CHD8-211ENST00000556833 CNTFP26441 200 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 CRABP2P29373 138 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 CASP3P42574 277 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 TBL3Q12788 808 aaKnown RBP13.5□□□□□ -0.25
CHD8-211ENST00000556833 EXOSC7Q15024 291 aaKnown RBP13.5□□□□□ -0.25
CHD8-211ENST00000556833 C6orf163Q5TEZ5 329 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 OR52E8Q6IFG1 317 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 MAATS1Q7Z4T9 603 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 PACS2Q86VP3 889 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 NUDT13Q86X67 352 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 DND1Q8IYX4 353 aaKnown RBP13.5□□□□□ -0.25
CHD8-211ENST00000556833 SIMC1Q8NDZ2 872 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 ABTB1Q969K4 478 aaPredicted RBP13.5□□□□□ -0.25
CHD8-211ENST00000556833 WDYHV1Q96HA8 205 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 ALPK1Q96QP1 1244 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 ERP44Q9BS26 406 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 YIPF4Q9BSR8 244 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 BRINP2Q9C0B6 783 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 NXF5Q9H1B4 397 aaKnown RBP13.5□□□□□ -0.25
CHD8-211ENST00000556833 OR10A5Q9H207 317 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 UBQLN3Q9H347 655 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 DDX31Q9H8H2 851 aaKnown RBP13.5□□□□□ -0.25
CHD8-211ENST00000556833 IPPKQ9H8X2 491 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 SNX15Q9NRS6 342 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 WHRNQ9P202 907 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 ADGRE2Q9UHX3 823 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 ACOT9Q9Y305 439 aa13.5□□□□□ -0.25
CHD8-211ENST00000556833 SYCE1LA8MT33 242 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 CAPN14A8MX76 684 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 EIF3HO15372 352 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHD8-211ENST00000556833 ATE1O95260 518 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 HPNP05981 417 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 KLK1P06870 262 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 TMIGD3P0DMS9 266 aaPredicted RBP13.49□□□□□ -0.25
CHD8-211ENST00000556833 ABCD3P28288 659 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 TIMP3P35625 211 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 SLCO1A2P46721 670 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 NAGLUP54802 743 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 NRG3P56975 720 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 FOXF2Q12947 444 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 DEFB113Q30KQ7 82 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 TBCELQ5QJ74 424 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
CHD8-211ENST00000556833 LIPJQ5W064 366 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 NSUN5P2Q63ZY6 315 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 VASNQ6EMK4 673 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 FAM111BQ6SJ93 734 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 RPS27LQ71UM5 84 aaKnown RBP13.49□□□□□ -0.25
CHD8-211ENST00000556833 PM20D2Q8IYS1 436 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 GCNT2Q8N0V5 402 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 ZNF615Q8N8J6 731 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 FAM83FQ8NEG4 500 aaPredicted RBP13.49□□□□□ -0.25
CHD8-211ENST00000556833 ADCY4Q8NFM4 1077 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 OR52B6Q8NGF0 335 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 FBXO25Q8TCJ0 367 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 SLC44A1Q8WWI5 657 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 ATP6V1E2Q96A05 226 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 ADIPOR1Q96A54 375 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 REPS1Q96D71 796 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 NSUN5Q96P11 429 aaKnown RBP13.49□□□□□ -0.25
CHD8-211ENST00000556833 NODALQ96S42 347 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 ITPAQ9BY32 194 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 ANGPTL4Q9BY76 406 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 MRPL1Q9BYD6 325 aaKnown RBP13.49□□□□□ -0.25
CHD8-211ENST00000556833 PRDM14Q9GZV8 571 aa13.49□□□□□ -0.25
CHD8-211ENST00000556833 NOL11Q9H8H0 719 aaKnown RBP13.49□□□□□ -0.25
CHD8-211ENST00000556833 SERHLQ9NQF3 203 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms