RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 FUT7Q11130 342 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 MAP4K2Q12851 820 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 DUSP8Q13202 625 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 TRMT12Q53H54 448 aaKnown RBP16.23■□□□□ 0.19
SHMT2-225ENST00000556798 TMEM198Q66K66 360 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 EPGNQ6UW88 154 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF551Q7Z340 670 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-225ENST00000556798 R3HCC1LQ7Z5L2 792 aaKnown RBP16.23■□□□□ 0.19
SHMT2-225ENST00000556798 LRRC34Q8IZ02 419 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 TEX19Q8NA77 164 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 CATSPER1Q8NEC5 780 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 ACTRT2Q8TDY3 377 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 MTERF3Q96E29 417 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF764Q96H86 408 aaPredicted RBP16.23■□□□□ 0.19
SHMT2-225ENST00000556798 AMDHD1Q96NU7 426 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 GAL3ST4Q96RP7 486 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 EBF4Q9BQW3 602 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 OR10A5Q9H207 317 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 AIG1Q9NVV5 245 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 BCAP29Q9UHQ4 241 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 ATP6V1HQ9UI12 483 aa16.23■□□□□ 0.19
SHMT2-225ENST00000556798 DYTNA2CJ06 578 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 NME6O75414 186 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-225ENST00000556798 ITGA10O75578 1167 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 OR2J2O76002 312 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 CBX7O95931 251 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 LAMP1P11279 417 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 PRPS1L1P21108 318 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 S1PR1P21453 382 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 IDH3AP50213 366 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 AQP5P55064 265 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 CLDN8P56748 225 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 KLRB1Q12918 225 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 HSPB3Q12988 150 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 EBPQ15125 230 aaKnown RBP16.22■□□□□ 0.19
SHMT2-225ENST00000556798 LSM12Q3MHD2 195 aaKnown RBP16.22■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF468Q5VIY5 522 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-225ENST00000556798 SLC6A19Q695T7 634 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 TMEM107Q6UX40 140 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 SLC29A4Q7RTT9 530 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 HPS6Q86YV9 775 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 RIMKLAQ8IXN7 391 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 LGI4Q8N135 537 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF615Q8N8J6 731 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 OR7G2Q8NG99 324 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 OR52R1Q8NGF1 315 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 OR8K3Q8NH51 312 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF675Q8TD23 568 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 CTHRC1Q96CG8 243 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 DPY30Q9C005 99 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.22■□□□□ 0.19
SHMT2-225ENST00000556798 ABI3Q9P2A4 366 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF639Q9UID6 485 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 CFAP46Q8IYW2 2715 aa16.22■□□□□ 0.19
SHMT2-225ENST00000556798 FCHO1O14526 889 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 ANKRD28O15084 1053 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 RPL3P39023 403 aaKnown RBP16.21■□□□□ 0.19
SHMT2-225ENST00000556798 MC3RP41968 323 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 TUBA3CQ13748 450 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 CPTPQ5TA50 214 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 TUBA3EQ6PEY2 450 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 ACAD11Q709F0 780 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 SPATA19Q7Z5L4 167 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 ARMC10Q8N2F6 343 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 ZNF843Q8N446 348 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 OR7G1Q8NGA0 311 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 C16orf52Q8NHV5 167 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 NUBPLQ8TB37 319 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 WWTR1Q9GZV5 400 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.21■□□□□ 0.19
SHMT2-225ENST00000556798 NPHS2Q9NP85 383 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 MYOTQ9UBF9 498 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 DTX4Q9Y2E6 619 aa16.21■□□□□ 0.19
SHMT2-225ENST00000556798 OR5H15A6NDH6 313 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 OR6C76A6NM76 312 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 C9JVG2 144 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 POLR3GO15318 223 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-225ENST00000556798 ZNF354AO60765 605 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-225ENST00000556798 TGDSO95455 350 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 GPC1P35052 558 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 CD96P40200 585 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 MDH1P40925 334 aaKnown RBP16.2■□□□□ 0.18
SHMT2-225ENST00000556798 CDK9P50750 372 aaKnown RBP16.2■□□□□ 0.18
SHMT2-225ENST00000556798 C21orf58P58505 322 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 UFM1P61960 85 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 OC90Q02509 493 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-225ENST00000556798 PGS1Q32NB8 556 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 Q6ZS92 163 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 OR5L2Q8NGL0 311 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 CEP70Q8NHQ1 597 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 RFWD2Q8NHY2 731 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 ZFP28Q8NHY6 868 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 HAS2Q92819 552 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 MAGED4Q96JG8 741 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 TEX37Q96LM6 180 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 SIGLEC12Q96PQ1 595 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 RASL10BQ96S79 203 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 UTP23Q9BRU9 249 aaKnown RBP16.2■□□□□ 0.18
SHMT2-225ENST00000556798 RNF32Q9H0A6 362 aa16.2■□□□□ 0.18
SHMT2-225ENST00000556798 TCF7L2Q9NQB0 619 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms