RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ANKDD1BA6NHY2 528 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 F8W735 103 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-220ENST00000556486 ACOT7O00154 380 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 BCKDKO14874 412 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PRAMEF4O60810 478 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 OR6B1O95007 311 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PF4V1P10720 104 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 BMP5P22003 454 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 CASP2P42575 452 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 GDF5P43026 501 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 KCNC1P48547 511 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 MECP2P51608 486 aaKnown RBP9.22□□□□□ -0.93
SCFD1-220ENST00000556486 ARL4CP56559 192 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 DCAF7P61962 342 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 FOXO1Q12778 655 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 SERTAD2Q14140 314 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 MPEG1Q2M385 716 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 C4orf46Q504U0 113 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PRAMEF9Q5VWM5 478 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 HSDL2Q6YN16 418 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 RTL4Q6ZR62 310 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 FRA10AC1Q70Z53 315 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 CYS1Q717R9 158 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 SLC22A16Q86VW1 577 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PDPRQ8NCN5 879 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 LINC01560Q8TB33 94 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PTPMT1Q8WUK0 201 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-220ENST00000556486 ASB15Q8WXK1 588 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 CFAP36Q96G28 342 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 KCNC2Q96PR1 638 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 TMEM79Q9BSE2 394 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 EFCAB11Q9BUY7 163 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 TTTY12Q9BZ98 90 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 ROGDIQ9GZN7 287 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PRDM7Q9NQW5 492 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PNO1Q9NRX1 252 aaKnown RBP9.22□□□□□ -0.93
SCFD1-220ENST00000556486 ACAD8Q9UKU7 415 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 ZNF490Q9ULM2 529 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-220ENST00000556486 EDARQ9UNE0 448 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 PCDHGB3Q9Y5G1 929 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 CLCA3PQ9Y6N3 262 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 KIAA1549Q9HCM3 1950 aa9.22□□□□□ -0.93
SCFD1-220ENST00000556486 ATP6AP2A0A1C7CYW4 349 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 TAPBPO15533 448 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 ATP6AP2O75787 350 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 CD22P20273 847 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 SAT1P21673 171 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 SOX3P41225 446 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 HK2P52789 917 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 PLA2G16P53816 162 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 SESN3P58005 492 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 ATP6V0D1P61421 351 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 IGLV3-21P80748 117 aaPredicted RBP9.21□□□□□ -0.94
SCFD1-220ENST00000556486 DR1Q01658 176 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 TGM3Q08188 693 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 LAPTM5Q13571 262 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 ZNF750Q32MQ0 723 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 SLC25A35Q3KQZ1 300 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 TMEM35AQ53FP2 167 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 Q5PR19 223 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 C1orf185Q5T7R7 199 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 SULT1C3Q6IMI6 304 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 OPN5Q6U736 354 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 IL20RBQ6UXL0 311 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 LINC00114Q6XXX2 140 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 CREG2Q8IUH2 290 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 CCDC103Q8IW40 242 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 FAM109AQ8N4B1 249 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 FAM47BQ8NA70 645 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 RELL2Q8NC24 303 aaPredicted RBP9.21□□□□□ -0.94
SCFD1-220ENST00000556486 CLRN3Q8NCR9 226 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 NAXEQ8NCW5 288 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 SRFBP1Q8NEF9 429 aaKnown RBP9.21□□□□□ -0.94
SCFD1-220ENST00000556486 OR5L2Q8NGL0 311 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 PTCD3Q96EY7 689 aaKnown RBP9.21□□□□□ -0.94
SCFD1-220ENST00000556486 COX4I2Q96KJ9 171 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 CAPZA3Q96KX2 299 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 UBXN10Q96LJ8 280 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 Q96M66 194 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 Q96MF0 132 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 CSF3RQ99062 836 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 FAM173AQ9BQD7 235 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 TBCDQ9BTW9 1192 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 EXO5Q9H790 373 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 IL1RL2Q9HB29 575 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 SH2D2AQ9NP31 389 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 DNAJC11Q9NVH1 559 aa9.21□□□□□ -0.94
SCFD1-220ENST00000556486 PTBP2Q9UKA9 531 aaKnown RBP9.21□□□□□ -0.94
SCFD1-220ENST00000556486 CUBNO60494 3623 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 A0A0G2JN53 185 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 MYOCOSA0A1B0GUC4 107 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 A0A1W2PPR1 153 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 TRIM64A6NGJ6 449 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 TRIM64BA6NI03 449 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 ZSCAN12O43309 604 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 ZNF354AO60765 605 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-220ENST00000556486 WDR1O75083 606 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 STK16O75716 305 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 IGKV3-11P04433 115 aa9.2□□□□□ -0.94
SCFD1-220ENST00000556486 IFNGR1P15260 489 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms