RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ANGPTL4Q9BY76 406 aa17.25■□□□□ 0.35
CDKN3-209ENST00000556102 OR10A5Q9H207 317 aa17.25■□□□□ 0.35
CDKN3-209ENST00000556102 VPS11Q9H270 941 aa17.25■□□□□ 0.35
CDKN3-209ENST00000556102 ADAM29Q9UKF5 820 aa17.25■□□□□ 0.35
CDKN3-209ENST00000556102 PRRC2AP48634 2157 aaKnown RBP17.24■□□□□ 0.35
CDKN3-209ENST00000556102 ESYT3A0FGR9 886 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 SYT5O00445 386 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 DVL2O14641 736 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 TRAPPC6AO75865 159 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 HPNP05981 417 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 UQCRC1P31930 480 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 CEACAM8P31997 349 aaPredicted RBP17.24■□□□□ 0.35
CDKN3-209ENST00000556102 PHBP35232 272 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 ASCL1P50553 236 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 CDK9P50750 372 aaKnown RBP17.24■□□□□ 0.35
CDKN3-209ENST00000556102 XKP51811 444 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 IST1P53990 364 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 RPP38P78345 283 aaKnown RBP17.24■□□□□ 0.35
CDKN3-209ENST00000556102 PAGE2Q7Z2X7 111 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 LACC1Q8IV20 430 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 PLD6Q8N2A8 252 aaKnown RBP17.24■□□□□ 0.35
CDKN3-209ENST00000556102 NAXEQ8NCW5 288 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 C17orf47Q8NEP4 570 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 NINJ1Q92982 152 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 LRRC46Q96FV0 321 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 TIMP4Q99727 224 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 POLDIP3Q9BY77 421 aaKnown RBP17.24■□□□□ 0.35
CDKN3-209ENST00000556102 UBQLN3Q9H347 655 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 ACSS3Q9H6R3 686 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 ZDHHC18Q9NUE0 388 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 AHSPQ9NZD4 102 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 PCTPQ9UKL6 214 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 TMCO1Q9UM00 188 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 C15orf41Q9Y2V0 281 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 ABCA4P78363 2273 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 MPDZO75970 2070 aa17.24■□□□□ 0.35
CDKN3-209ENST00000556102 DOCK7Q96N67 2140 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 STX16-NPEPL1H3BU86 382 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 STX16O14662 325 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 KLK1P06870 262 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 RBP1P09455 135 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 CPMP14384 443 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 NT5EP21589 574 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 BMP5P22003 454 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 TIMP3P35625 211 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 MASP1P48740 699 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 ETF1P62495 437 aaKnown RBP17.23■□□□□ 0.35
CDKN3-209ENST00000556102 SLC7A5Q01650 507 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 TRAF3Q13114 568 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 SNTB1Q13884 538 aaKnown RBP17.23■□□□□ 0.35
CDKN3-209ENST00000556102 SF3B4Q15427 424 aaKnown RBP eCLIP17.23■□□□□ 0.35
CDKN3-209ENST00000556102 FNDC7Q5VTL7 733 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 TTC19Q6DKK2 380 aaPredicted RBP17.23■□□□□ 0.35
CDKN3-209ENST00000556102 PACS2Q86VP3 889 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 PM20D2Q8IYS1 436 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 TNIP2Q8NFZ5 429 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 OR7G1Q8NGA0 311 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 PHF21BQ96EK2 531 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 FOXC2Q99958 501 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 SH3GL2Q99962 352 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 MRPL1Q9BYD6 325 aaKnown RBP17.23■□□□□ 0.35
CDKN3-209ENST00000556102 PRDM14Q9GZV8 571 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 ZNF358Q9NW07 568 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 CRIM1Q9NZV1 1036 aa17.23■□□□□ 0.35
CDKN3-209ENST00000556102 KIAA1549Q9HCM3 1950 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 KDM4EB2RXH2 506 aaPredicted RBP17.22■□□□□ 0.35
CDKN3-209ENST00000556102 ACSL3O95573 720 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 IL2RAP01589 272 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 PORP16435 677 aaPredicted RBP17.22■□□□□ 0.35
CDKN3-209ENST00000556102 ABCD3P28288 659 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 CASP3P42574 277 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 MAGEA12P43365 314 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 IFT88Q13099 833 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 FBXL19-AS1Q494R0 122 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 GGTA1PQ4G0N0 100 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 FLYWCH1Q4VC44 716 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 NHSL2Q5HYW2 709 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 CCNYL2Q5T2Q4 361 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 VASNQ6EMK4 673 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 C8orf74Q6P047 294 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 SYT10Q6XYQ8 523 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 PRR22Q8IZ63 422 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 RNASE6Q93091 150 aaKnown RBP17.22■□□□□ 0.35
CDKN3-209ENST00000556102 ISL2Q96A47 359 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 HSPBAP1Q96EW2 488 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 TMEM41AQ96HV5 264 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 GPATCH1Q9BRR8 931 aaKnown RBP17.22■□□□□ 0.35
CDKN3-209ENST00000556102 CXXC4Q9H2H0 198 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 ZBTB26Q9HCK0 441 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 RASSF1Q9NS23 344 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 NINJ2Q9NZG7 142 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 ZNF629Q9UEG4 869 aaPredicted RBP17.22■□□□□ 0.35
CDKN3-209ENST00000556102 MTRF1LQ9UGC7 380 aaKnown RBP17.22■□□□□ 0.35
CDKN3-209ENST00000556102 CAMK2AQ9UQM7 478 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 NF1P21359 2839 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 MED12Q93074 2177 aa17.22■□□□□ 0.35
CDKN3-209ENST00000556102 FAM221AA4D161 298 aa17.21■□□□□ 0.35
CDKN3-209ENST00000556102 SMIM24O75264 130 aa17.21■□□□□ 0.35
CDKN3-209ENST00000556102 CDH16O75309 829 aa17.21■□□□□ 0.35
CDKN3-209ENST00000556102 GUCY1B2O75343 617 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms