RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 DNAJB6O75190 326 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 MMP11P24347 488 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 OTX2P32243 289 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 CRATP43155 626 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 CDK9P50750 372 aaKnown RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 PRKAG1P54619 331 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 GAB1Q13480 694 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 CAPRIN1Q14444 709 aaKnown RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF267Q14586 743 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 LTB4RQ15722 352 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 TBC1D25Q3MII6 688 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 SFT2D3Q587I9 215 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF628Q5EBL2 1059 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 PAGE3Q5JUK9 113 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 CPZQ66K79 652 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ERICH5Q6P6B1 374 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 CPEB2Q7Z5Q1 589 aaKnown RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ANKRD37Q7Z713 158 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 RETREG3Q86VR2 466 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ZSCAN1Q8NBB4 408 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 NUP43Q8NFH3 380 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ADCY4Q8NFM4 1077 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 SUN3Q8TAQ9 357 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 KAT2AQ92830 837 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 TSLPQ969D9 159 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ELP4Q96EB1 424 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 NEURL3Q96EH8 262 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 PHF12Q96QT6 1004 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 KCTD14Q9BQ13 255 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 INPP5KQ9BT40 448 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 SCNM1Q9BWG6 230 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 TRIM15Q9C019 465 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 OR8D2Q9GZM6 311 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 PAIP1Q9H074 479 aaKnown RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 TRIM45Q9H8W5 580 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-220ENST00000555634 CXorf21Q9HAI6 301 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 TPT1P8Q9HAU6 139 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 SLAMF7Q9NQ25 335 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 EQTNQ9NQ60 294 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 SERHLQ9NQF3 203 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 NECTIN3Q9NQS3 549 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 EXD2Q9NVH0 621 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 KLK13Q9UKR3 277 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 ERVK-19Q9WJR5 959 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 PCDHB14Q9Y5E9 798 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 PKD1L2Q7Z442 2459 aa10.47□□□□□ -0.73
SHMT2-220ENST00000555634 KNTC1P50748 2209 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SPTBN4Q9H254 2564 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 NSG1A0A0A6YYJ2 146 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 CFAP73A6NFT4 308 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 OR6C76A6NM76 312 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 WASHC1A8K0Z3 465 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 C5orf58C9J3I9 102 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 PLOD3O60568 738 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 ICAM2P13598 275 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 PGM1P36871 562 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 CDKN2CP42773 168 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SLC7A2P52569 658 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 MTPNP58546 118 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SLC25A3Q00325 362 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 EEF1A2Q05639 463 aaKnown RBP10.46□□□□□ -0.73
SHMT2-220ENST00000555634 MAP4K2Q12851 820 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SSPNQ14714 243 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 MPEG1Q2M385 716 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 PRICKLE4Q2TBC4 344 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 GCNT6Q5T4J0 391 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 ZCCHC12Q6PEW1 402 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 PAPD4Q6PIY7 484 aaKnown RBP10.46□□□□□ -0.73
SHMT2-220ENST00000555634 RINLQ6ZS11 566 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 C16orf62Q7Z3J2 963 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SLC30A8Q8IWU4 369 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 OR2L13Q8N349 312 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 CDRT4Q8N9R6 151 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 ZNF248Q8NDW4 579 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 OR52N2Q8NGI0 321 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 PNPT1Q8TCS8 783 aaKnown RBP10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SLC2A12Q8TD20 617 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 KCNE4Q8WWG9 221 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 NKD1Q969G9 470 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 PPWD1Q96BP3 646 aaKnown RBP10.46□□□□□ -0.73
SHMT2-220ENST00000555634 VMP1Q96GC9 406 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 CPPED1Q9BRF8 314 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SLC39A3Q9BRY0 314 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 ALG2Q9H553 416 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 CXorf36Q9H7Y0 433 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 SLC52A3Q9NQ40 469 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 MAT2BQ9NZL9 334 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 VAPAQ9P0L0 249 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 P2RX2Q9UBL9 471 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 MRTO4Q9UKD2 239 aaKnown RBP10.46□□□□□ -0.73
SHMT2-220ENST00000555634 MSRB2Q9Y3D2 182 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 PCDHGA6Q9Y5G7 932 aa10.46□□□□□ -0.73
SHMT2-220ENST00000555634 A8MUA0 341 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 FXYD1O00168 92 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 ASNA1O43681 348 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 SCN2BO60939 215 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 AK1P00568 194 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 ALOX5P09917 674 aa10.45□□□□□ -0.74
SHMT2-220ENST00000555634 KRT20P35900 424 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms