RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HPRP00739 348 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 PTMAP06454 111 aaKnown RBP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 GHRP10912 638 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 LMO2P25791 158 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 PRDX6P30041 224 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 CCND2P30279 289 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 SPRP35270 261 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 CAMLGP49069 296 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 ATP4BP51164 291 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 PAX8Q06710 450 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 FCHO2Q0JRZ9 810 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 ITPK1Q13572 414 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 RAPSNQ13702 412 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 SIX1Q15475 284 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 ZNF528Q3MIS6 628 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 GLIPR1L2Q4G1C9 344 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 UNC50Q53HI1 259 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 RAET1GQ6H3X3 334 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 IRGCQ6NXR0 463 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 DPY19L2P2Q6ZN68 376 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 GOLGA7Q7Z5G4 137 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 RPAINQ86UA6 219 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 RANBP3LQ86VV4 465 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 PYROXD2Q8N2H3 581 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 FAM71CQ8NEG0 241 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 TAF15Q92804 592 aaKnown RBP eCLIP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 PSMB7Q99436 277 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 VGLL1Q99990 258 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 NDUFAF3Q9BU61 184 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 RBM24Q9BX46 236 aaKnown RBP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 LIME1Q9H400 295 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 ELL3Q9HB65 397 aaPredicted RBP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 MIOXQ9UGB7 285 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 IL20RAQ9UHF4 553 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 SLC9A8Q9Y2E8 581 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 FAM205AQ6ZU69 1335 aa4.41□□□□□ -1.7
CKS1BP1-201ENST00000555221 MROH2BQ7Z745 1585 aa4.4□□□□□ -1.7
CKS1BP1-201ENST00000555221 C19orf81C9J6K1 198 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 TXNL1O43396 289 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 TRIM16O95361 564 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 RPA1P27694 616 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 ACY1Q03154 408 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 KARSQ15046 597 aaKnown RBP4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 C12orf60Q5U649 245 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 LIPKQ5VXJ0 399 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 TMEM26Q6ZUK4 368 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 TMUB2Q71RG4 321 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 FCGR1BQ92637 280 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 MRPL38Q96DV4 380 aaKnown RBP4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 CPXM1Q96SM3 734 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 RAB11FIP5Q9BXF6 653 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 NLNQ9BYT8 704 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 LRRCC1Q9C099 1032 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 GFRA4Q9GZZ7 299 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 HEXA-AS1Q9H8Q6 139 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 NGBQ9NPG2 151 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 HPF1Q9NWY4 346 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 SOHLH2Q9NX45 425 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 SEC14L4Q9UDX3 406 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 FBXO7Q9Y3I1 522 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 CPQQ9Y646 472 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 RAD54L2Q9Y4B4 1467 aa4.4□□□□□ -1.71
CKS1BP1-201ENST00000555221 ERCC6Q03468 1493 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 A0A0A6YYD4 124 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 CYB561D2O14569 222 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 SERPINB2P05120 415 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 FCGR3AP08637 254 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 CCDC159P0C7I6 412 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 DNAJB1P25685 340 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 PPP2R1BP30154 601 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 MAT2AP31153 395 aaKnown RBP4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 CHRNA3P32297 505 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 GABPB1Q06547 395 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZSWIM7Q19AV6 140 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 TCHHL1Q5QJ38 904 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 WDR25Q64LD2 544 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 PAQR6Q6TCH4 344 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 SYVN1Q86TM6 617 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 LUZP1Q86V48 1076 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 VPS36Q86VN1 386 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 AMZ2Q86W34 360 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 GPBP1Q86WP2 473 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 ERC1Q8IUD2 1116 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 CCDC71Q8IV32 467 aaPredicted RBP4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 ABHD12Q8N2K0 398 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 Q8N377 158 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 C4orf32Q8N8J7 132 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNRF1Q8ND25 227 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 NCLNQ969V3 563 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 WRAP53Q9BUR4 548 aaKnown RBP4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 EMCNQ9ULC0 261 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 SALL1Q9NSC2 1324 aa4.39□□□□□ -1.71
CKS1BP1-201ENST00000555221 SYNJ2O15056 1496 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 NPIPA5A0A0B4J1W7 369 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 NPIPA5E9PKD4 350 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 EI24O14681 340 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 STK17BO94768 372 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms