RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ERAL1O75616 437 aaKnown RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 C1QCP02747 245 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SERPINA7P05543 415 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 PGRP06401 933 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SLC35E2P0CK97 266 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 CSNK2A2P19784 350 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SLC6A2P23975 617 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 NTSP30990 170 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 PGM1P36871 562 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 STT3AP46977 705 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 EFNA3P52797 238 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 POLE2P56282 527 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 IGLV3-21P80748 117 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 C2orf80Q0P641 193 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 CHAF1BQ13112 559 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ART3Q13508 389 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 BTBD16Q32M84 506 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 DNAL1Q4LDG9 190 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 TIGD2Q4W5G0 525 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 PIGGQ5H8A4 983 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 PLAG1Q6DJT9 500 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 OR4F3Q6IEY1 312 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ANKRD26P1Q6NSI1 321 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 JMJD6Q6NYC1 403 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 R3HCC1LQ7Z5L2 792 aaKnown RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 OR4N5Q8IXE1 308 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SLC15A3Q8IY34 581 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ST13P4Q8IZP2 240 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 GALNT16Q8N428 558 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 FAM13CQ8NE31 585 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 OR8J2Q8NGG1 315 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 DNAJB14Q8TBM8 379 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 EXTL1Q92935 676 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ANKRD9Q96BM1 317 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ROPN1LQ96C74 230 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ART5Q96L15 291 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SLC39A3Q9BRY0 314 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 INPP5KQ9BT40 448 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 TRIM4Q9C037 500 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 PAIP1Q9H074 479 aaKnown RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 MMADHCQ9H3L0 296 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 REEP4Q9H6H4 257 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.19□□□□□ -0.786e-6■■□□□ 12.1
SHMT2-218ENST00000555213 CMTM6Q9NX76 183 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SLC25A37Q9NYZ2 338 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 TMEM181Q9P2C4 612 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 COPS7AQ9UBW8 275 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 SLC7A8Q9UHI5 535 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 LEF1Q9UJU2 399 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-218ENST00000555213 PACSIN3Q9UKS6 424 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 MAPRE3Q9UPY8 281 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 ASPMQ8IZT6 3477 aa10.19□□□□□ -0.78
SHMT2-218ENST00000555213 A8MUA0 341 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 C17orf105B2RV13 164 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 SCAMP2O15127 329 aaKnown RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 PGRMC2O15173 223 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 TBX19O60806 448 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 NPPAP01160 153 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 SFTPCP11686 197 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 CPMP14384 443 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 S100A3P33764 101 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 CDKN2CP42773 168 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 CCL11P51671 97 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 XKP51811 444 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 CLNS1AP54105 237 aaKnown RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 SLC26A5P58743 744 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 MS4A2Q01362 244 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 SRSF11Q05519 484 aaKnown RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 CAPRIN1Q14444 709 aaKnown RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 PGS1Q32NB8 556 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 NANOGP8Q6NSW7 305 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 C16orf89Q6UX73 402 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 TICAM1Q8IUC6 712 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 GALNT12Q8IXK2 581 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 ULK2Q8IYT8 1036 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 LRRC25Q8N386 305 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 B3GNT7Q8NFL0 401 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 M1APQ8TC57 530 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 WDR60Q8WVS4 1066 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 TMEM125Q96AQ2 219 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 EXOSC8Q96B26 276 aaKnown RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 PPCDCQ96CD2 204 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 MTERF3Q96E29 417 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 ZNF764Q96H86 408 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 THOC3Q96J01 351 aaKnown RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 OR52E6Q96RD3 313 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 HOPXQ9BPY8 73 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 MESP1Q9BRJ9 268 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 TRIM8Q9BZR9 551 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 LHPPQ9H008 270 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 ADNPQ9H2P0 1102 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 DENND2DQ9H6A0 471 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-218ENST00000555213 NANOGQ9H9S0 305 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 IL1RL2Q9HB29 575 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 MMP25Q9NPA2 562 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 ATAD3AQ9NVI7 634 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 GPR83Q9NYM4 423 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 ABCD2Q9UBJ2 740 aa10.18□□□□□ -0.78
SHMT2-218ENST00000555213 TEKT2Q9UIF3 430 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms