RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 OLR1P78380 273 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 DUSP8Q13202 625 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 SYPL1Q16563 259 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 HIPK1Q86Z02 1210 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 ZDHHC13Q8IUH4 622 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 ZC3H7AQ8IWR0 971 aaKnown RBP8.36□□□□□ -1.07
TDP1-210ENST00000554976 CARFQ8N187 725 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 OR56A1Q8NGH5 318 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 ZNF675Q8TD23 568 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 RAB8BQ92930 207 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 TOR3AQ9H497 397 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 SEMA3GQ9NS98 782 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 PNPLA3Q9NST1 481 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 STARD5Q9NSY2 213 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 MS4A12Q9NXJ0 267 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 PILRBQ9UKJ0 227 aa8.36□□□□□ -1.07
TDP1-210ENST00000554976 A8MVJ9 347 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 TXNDC9O14530 226 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 HRO43593 1189 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 FGF17O60258 216 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 SDC3O75056 442 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 JRKO75564 520 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 TNFAIP8O95379 198 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 TFAP2AP05549 437 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 CPMP14384 443 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 PRKACGP22612 351 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 CPN2P22792 545 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 HOXD12P35452 270 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 KCNJ5P48544 419 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 FNTBP49356 437 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 KHKP50053 298 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 EMP3P54852 163 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 PPP1R8Q12972 351 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 PRICKLE4Q2TBC4 344 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 IFI44LQ53G44 452 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 WDR45BQ5MNZ6 344 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ZNF770Q6IQ21 691 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 ARMC8Q8IUR7 673 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 LRRC25Q8N386 305 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 LSM14AQ8ND56 463 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 ADAMTS16Q8TE57 1224 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 RERGQ96A58 199 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 C16orf58Q96GQ5 468 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 BTBD2Q9BX70 525 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 MIR1-1HGQ9H1L0 117 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 IGHV1OR21-1A0A087WYE8 117 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 A0A1B0GVT2 93 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 TLCD2A6NGC4 264 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 NUDT21O43809 227 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 CLIC3O95833 236 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 HMGN2P05204 90 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 ALPPL2P10696 532 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 CSF2RBP32927 897 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 BUD31P41223 144 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 BNIP3Q12983 259 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 C16orf87Q6PH81 154 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 MCATQ8IVS2 390 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 SLC35F3Q8IY50 421 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 PHF10Q8WUB8 498 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 TPD52L3Q96J77 140 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 OR7D2Q96RA2 312 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 TREX2Q9BQ50 279 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 GABARAPL3Q9BY60 117 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 GRIP2Q9C0E4 1043 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 EPB41L1Q9H4G0 881 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ANKRA2Q9H9E1 313 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ENTPD4Q9Y227 616 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 TMEM184BQ9Y519 407 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 A0A087WV62 115 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ARRDC5A6NEK1 342 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 J3KTA2 159 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 SRPX2O60687 465 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 H6PDO95479 791 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 MSL3P1P0C860 447 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 S1PR1P21453 382 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 MPIP34949 423 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 SIM1P81133 766 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 SIGLEC14Q08ET2 396 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 NPTX1Q15818 432 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 DEFB110Q30KQ9 67 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 CNPY1Q3B7I2 92 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 KCTD21Q4G0X4 260 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ZNF691Q5VV52 312 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ANGPTL8Q6UXH0 198 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 DGAT2L6Q6ZPD8 337 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 STK32CQ86UX6 486 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 TSPYL5Q86VY4 417 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 LACC1Q8IV20 430 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 DHRSXQ8N5I4 330 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ZNF655Q8N720 491 aaPredicted RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 NUP43Q8NFH3 380 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 OR4K14Q8NGD5 310 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 GEMIN6Q8WXD5 167 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 BBS4Q96RK4 519 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 MRPS26Q9BYN8 205 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 RBM38Q9H0Z9 239 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 SLC38A1Q9H2H9 487 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 ZCCHC3Q9NUD5 404 aaKnown RBP8.35□□□□□ -1.07
TDP1-210ENST00000554976 ACER3Q9NUN7 267 aa8.35□□□□□ -1.07
TDP1-210ENST00000554976 PTGFRNQ9P2B2 879 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms