RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 NECTIN3Q9NQS3 549 aa4.42□□□□□ -1.7
ATXN3-229ENST00000554672 PNO1Q9NRX1 252 aaKnown RBP4.42□□□□□ -1.7
ATXN3-229ENST00000554672 SPTLC3Q9NUV7 552 aa4.42□□□□□ -1.7
ATXN3-229ENST00000554672 QPCTLQ9NXS2 382 aa4.42□□□□□ -1.7
ATXN3-229ENST00000554672 TUBA8Q9NY65 449 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-229ENST00000554672 MARCH4Q9P2E8 410 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-229ENST00000554672 KLHL42Q9P2K6 505 aa4.42□□□□□ -1.7
ATXN3-229ENST00000554672 ZNF223Q9UK11 482 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-229ENST00000554672 MMACHCQ9Y4U1 282 aa4.42□□□□□ -1.7
ATXN3-229ENST00000554672 FLNAP21333 2647 aaKnown RBP4.42□□□□□ -1.7
ATXN3-229ENST00000554672 HCFC1P51610 2035 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NBEAL1Q6ZS30 2694 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 ATRQ13535 2644 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 A0A087X1B8 175 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 SYNDIG1LA6NDD5 238 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 GOLGA6L9A6NEM1 432 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 URADA6NGE7 173 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CD8B2A6NJW9 211 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 EEF1E1-BLOC1S5C9J1V9 151 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 E5RI56 91 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 WWP2O00308 870 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 PJA2O43164 708 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NDUFS4O43181 175 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 EEF1E1O43324 174 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 OR1F1O43749 312 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 TLX2O43763 284 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 PRKNO60260 465 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CEP104O60308 925 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 TMCC2O75069 709 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NIPSNAP2O75323 286 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 GYPCP04921 128 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 SERPIND1P05546 499 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 MPC1LP0DKB6 136 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 PAX1P15863 534 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 PTX3P26022 381 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 IMPA1P29218 277 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 STIP1P31948 543 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 MARCKSL1P49006 195 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CCR8P51685 355 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 AGFG1P52594 562 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 HSD17B7P56937 341 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 TPM4P67936 248 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 EEF1A1P68104 462 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 RGS1Q08116 209 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 DMTNQ08495 405 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 BMPR2Q13873 1038 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 KCNJ11Q14654 390 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 IQCB1Q15051 598 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 SMN1Q16637 294 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 ACSF3Q4G176 576 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 RNF187Q5TA31 235 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 EEF1A1P5Q5VTE0 462 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 SLC22A10Q63ZE4 541 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NSUN5P2Q63ZY6 315 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 MRNIPQ6NTE8 343 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CYHR1Q6ZMK1 362 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 STRA8Q7Z7C7 330 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 JAZF1Q86VZ6 243 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 C17orf64Q86WR6 236 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 PM20D2Q8IYS1 436 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 LRRC25Q8N386 305 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 RASGEF1CQ8N431 466 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 OTUD6BQ8N6M0 293 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 GPATCH11Q8N954 259 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 ANKRD53Q8N9V6 530 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 ABHD11Q8NFV4 315 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 OR4K1Q8NGD4 311 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 OR5AN1Q8NGI8 311 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 OR8K3Q8NH51 312 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 PPP1R14CQ8TAE6 165 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NEIL3Q8TAT5 605 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NT5CQ8TCD5 201 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 UTP15Q8TED0 518 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 LPGAT1Q92604 370 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 KRT35Q92764 455 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 DAZLQ92904 295 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 GFM2Q969S9 779 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 FAM136AQ96C01 138 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 SLC7A6OSQ96CW6 309 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NTNG2Q96CW9 530 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 HSPBAP1Q96EW2 488 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 TIMP4Q99727 224 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CCL19Q99731 98 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 RBM24Q9BX46 236 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 RHBGQ9H310 441 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NHEJ1Q9H9Q4 299 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 LIN28AQ9H9Z2 209 aaKnown RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CALHM2Q9HA72 323 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CHRAC1Q9NRG0 131 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 GPRC5BQ9NZH0 403 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 GALPQ9UBC7 116 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 BOKQ9UMX3 212 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 ATG4BQ9Y4P1 393 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 CLCA3PQ9Y6N3 262 aa4.41□□□□□ -1.7
ATXN3-229ENST00000554672 MAP1AP78559 2803 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-229ENST00000554672 NSD1Q96L73 2696 aaPredicted RBP4.4□□□□□ -1.7
ATXN3-229ENST00000554672 C15orf38-AP3S2A0A0A6YYH1 394 aa4.4□□□□□ -1.71
ATXN3-229ENST00000554672 TRBC2A0A5B9 178 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms