RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 FBXO45P0C2W1 286 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 TACR1P25103 407 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 SERPINB1P30740 379 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 STT3AP46977 705 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 ASCL1P50553 236 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 STX4Q12846 297 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 GTF2H2Q13888 395 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 SLC29A2Q14542 456 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 DEFB113Q30KQ7 82 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 TMEM35AQ53FP2 167 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 DCST1Q5T197 706 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 BICRALQ6AI39 1079 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 GTF2H2CQ6P1K8 395 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 METTL2BQ6P1Q9 378 aaKnown RBP10.59□□□□□ -0.71
TUBB3-204ENST00000554116 CLEC9AQ6UXN8 241 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 GOLGA7Q7Z5G4 137 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 PRIMA1Q86XR5 153 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 FBXW8Q8N3Y1 598 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 PTGR2Q8N8N7 351 aaPredicted RBP10.59□□□□□ -0.71
TUBB3-204ENST00000554116 LRRN4CLQ8ND94 238 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 OR5L2Q8NGL0 311 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 SPATA3Q8NHX4 192 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 LINC01560Q8TB33 94 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 UCN3Q969E3 161 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 ATP6V1E2Q96A05 226 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 MDFIQ99750 246 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 TBCDQ9BTW9 1192 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 ROGDIQ9GZN7 287 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 UBQLN3Q9H347 655 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 JKAMPQ9P055 326 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 XPR1Q9UBH6 696 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 ADGRE2Q9UHX3 823 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 PCDHGA11Q9Y5H2 935 aa10.59□□□□□ -0.71
TUBB3-204ENST00000554116 SONP18583 2426 aaKnown RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 A0A1W2PS29 197 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 HSPB2A8KAH6 182 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 RAF1P04049 648 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 EPXP11678 715 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 CD53P19397 219 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 TNNI3P19429 210 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 HIST1H1TP22492 207 aaPredicted RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 GCAP28676 217 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 TIMP3P35625 211 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 PIK3CGP48736 1102 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 AGFG1P52594 562 aaKnown RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 DUSP8Q13202 625 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 DDX39BQ13838 428 aaKnown RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 SERTAD2Q14140 314 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 RCN2Q14257 317 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 HSPB2Q16082 182 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 CPSF6Q16630 551 aaKnown RBP eCLIP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 AP5B1Q2VPB7 878 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 TEX35Q5T0J7 233 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 DEPDC1Q5TB30 811 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 KHDRBS2Q5VWX1 349 aaKnown RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 TMEM198Q66K66 360 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 C18orf63Q68DL7 685 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 TMEM64Q6YI46 380 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 TIFABQ6ZNK6 161 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 CXorf67Q86X51 503 aaPredicted RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 ZNF441Q8N8Z8 693 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 HUS1BQ8NHY5 278 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 NUDT8Q8WV74 236 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 MTBPQ96DY7 904 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 FBXL20Q96IG2 436 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 MTERF1Q99551 399 aaKnown RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 ZNF717Q9BY31 904 aaPredicted RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 PRDM14Q9GZV8 571 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 EPB41L4BQ9H329 900 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 OR51B5Q9H339 312 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 NOL11Q9H8H0 719 aaKnown RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 QPCTLQ9NXS2 382 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 ZNF629Q9UEG4 869 aaPredicted RBP10.58□□□□□ -0.72
TUBB3-204ENST00000554116 TMCO1Q9UM00 188 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 RNF11Q9Y3C5 154 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 NBEAL1Q6ZS30 2694 aa10.58□□□□□ -0.72
TUBB3-204ENST00000554116 IQANK1A0A1B0GTG1 560 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 SYNDIG1LA6NDD5 238 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 KIAA1324LA8MWY0 1029 aaPredicted RBP10.57□□□□□ -0.72
TUBB3-204ENST00000554116 AHRRA9YTQ3 701 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 H0YIV9 168 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 STX16-NPEPL1H3BU86 382 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 OR7A17O14581 309 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 STX16O14662 325 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 UGDHO60701 494 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 CLDN9O95484 217 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 HRGP04196 525 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 PTX3P26022 381 aaPredicted RBP10.57□□□□□ -0.72
TUBB3-204ENST00000554116 ARL1P40616 181 aaPredicted RBP10.57□□□□□ -0.72
TUBB3-204ENST00000554116 PIK3CBP42338 1070 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 SSR2P43308 183 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 SLCO1A2P46721 670 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 RAP1GDS1P52306 607 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 HNRNPH2P55795 449 aaKnown RBP10.57□□□□□ -0.72
TUBB3-204ENST00000554116 SLC37A1P57057 533 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 RPS13P62277 151 aaKnown RBP10.57□□□□□ -0.72
TUBB3-204ENST00000554116 KCNJ2P63252 427 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 PHEXP78562 749 aa10.57□□□□□ -0.72
TUBB3-204ENST00000554116 EBPQ15125 230 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms