RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SEC22BO75396 215 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 RSL1D1O76021 490 aaKnown RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 WISP1O95388 367 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 F10P00742 488 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 CRYABP02511 175 aaKnown RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ANXA4P09525 319 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 SLC35E2P0CK97 266 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 PORP16435 677 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 CSNK2A2P19784 350 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 GRK2P25098 689 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 TPP2P29144 1249 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 SERPINB3P29508 390 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 TIA1P31483 386 aaKnown RBP eCLIP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 GALNSP34059 522 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 HTR6P50406 440 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 TNFSF10P50591 281 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 SSR4P51571 173 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 XKP51811 444 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 EFNA3P52797 238 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 TBL3Q12788 808 aaKnown RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ZNF267Q14586 743 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 PLEKHN1Q494U1 663 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ARL13AQ5H913 290 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ZNF766Q5HY98 468 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 SH2D4BQ5SQS7 431 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 BEND6Q5SZJ8 279 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 H3F3CQ6NXT2 135 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 RNF111Q6ZNA4 994 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 EXOC3L1Q86VI1 746 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 SHISA5Q8N114 240 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 BEST3Q8N1M1 668 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 KIF2BQ8N4N8 673 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 CISD2Q8N5K1 135 aaKnown RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 BCORP1Q8N888 145 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ANKRD42Q8N9B4 389 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 NFAM1Q8NET5 270 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 OR8K3Q8NH51 312 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 FAM76AQ8TAV0 307 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 SLC22A8Q8TCC7 542 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 SLC2A12Q8TD20 617 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 CHTF18Q8WVB6 975 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 PSMF1Q92530 271 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ANKRD9Q96BM1 317 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 KLHL29Q96CT2 875 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 CCT7Q99832 543 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 MECRQ9BV79 373 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ACPTQ9BZG2 426 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 LRTM1Q9HBL6 345 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ZBTB20Q9HC78 741 aaPredicted RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 LRFN1Q9P244 771 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 ZNF225Q9UK10 706 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 CFL2Q9Y281 166 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 WBP11Q9Y2W2 641 aaKnown RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 YARS2Q9Y2Z4 477 aaKnown RBP7.76□□□□□ -1.17
PSEN1-209ENST00000553855 TRAF6Q9Y4K3 522 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 PCDHA9Q9Y5H5 950 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 MGAQ8IWI9 3026 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 NBEAQ8NFP9 2946 aa7.76□□□□□ -1.17
PSEN1-209ENST00000553855 PIEZO2Q9H5I5 2752 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 OR6C76A6NM76 312 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 A8MVJ9 347 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 CAPN14A8MX76 684 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TMEM114B3SHH9 223 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 UBFD1O14562 309 aaKnown RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 PRKRAO75569 313 aaKnown RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 ITGA10O75578 1167 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 SORBS2O94875 1100 aaKnown RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 RASAL1O95294 804 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 SERPINE1P05121 402 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 FGF4P08620 206 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 IL3P08700 152 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 CPMP14384 443 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 CHN1P15882 459 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 HLCSP50747 726 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 MLF1P58340 268 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 IGLV3-21P80748 117 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 ID3Q02535 119 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 ZNF763Q0D2J5 394 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 C2orf80Q0P641 193 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TUBA3CQ13748 450 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 CASP8Q14790 479 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 OR1C1Q15619 314 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 CLEC6AQ6EIG7 209 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 SLC25A25Q6KCM7 469 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 RPUSD3Q6P087 351 aaKnown RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 SLC48A1Q6P1K1 146 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TUBA3EQ6PEY2 450 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 OPN5Q6U736 354 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 ZCCHC23Q6ZST2 131 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 GPALPP1Q8IXQ4 340 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 DMRTC2Q8IXT2 367 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TAGAPQ8N103 731 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 APCDD1LQ8NCL9 501 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 CATSPER1Q8NEC5 780 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 AGR3Q8TD06 166 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 PTPMT1Q8WUK0 201 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TWIST2Q8WVJ9 160 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 ASB15Q8WXK1 588 aa7.75□□□□□ -1.17
PSEN1-209ENST00000553855 PPWD1Q96BP3 646 aaKnown RBP7.75□□□□□ -1.17
PSEN1-209ENST00000553855 TM4SF18Q96CE8 201 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms