RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZNF253O75346 499 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 PIGRP01833 764 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 SP9P0CG40 484 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 CASTP20810 708 aaKnown RBP2.83□□□□□ -1.96
SCFD1-210ENST00000553693 RGRP47804 291 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 BACE1P56817 501 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 ARF5P84085 180 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 NFE2L1Q14494 772 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 CCL14Q16627 93 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 PCK2Q16822 640 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 ARMCX4Q5H9R4 360 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 SHEQ5VZ18 495 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 CASC4Q6P4E1 433 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 C17orf107Q6ZR85 190 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 OTOAQ7RTW8 1153 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 TUSC5Q8IXB3 177 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 SLC43A2Q8N370 569 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 ATAD1Q8NBU5 361 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 EXOC4Q96A65 974 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 PPP1R16AQ96I34 528 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 CDHR1Q96JP9 859 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 ACAT2Q9BWD1 397 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 FUT8Q9BYC5 575 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 FAM129AQ9BZQ8 928 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.83□□□□□ -1.96
SCFD1-210ENST00000553693 ADAM22Q9P0K1 906 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 VPS18Q9P253 973 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 RSPH14Q9UHP6 348 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 ODF2LQ9ULJ1 636 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 HBS1LQ9Y450 684 aaKnown RBP2.83□□□□□ -1.96
SCFD1-210ENST00000553693 TTC21BQ7Z4L5 1316 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 ANKRD36BQ8N2N9 1353 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 KCPQ6ZWJ8 1503 aa2.83□□□□□ -1.96
SCFD1-210ENST00000553693 CICQ96RK0 1608 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 PIK3C2AO00443 1686 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 TRAV9-2A0A087WT02 112 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 A0A087WV48 116 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF732B4DXR9 585 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 ANHXE9PGG2 379 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 SLC33A1O00400 549 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 CDX4O14627 284 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 IFIT3O14879 490 aaKnown RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 SLC7A4O43246 635 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 FCGR3BO75015 233 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 FRAT2O75474 233 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 RLN1P04808 185 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 GMPSP49915 693 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 ADARP55265 1226 aaKnown RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 RPS27AP62979 156 aaKnown RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 AP1B1Q10567 949 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF273Q14593 569 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 C2orf83Q53S99 150 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 CCDC158Q5M9N0 1113 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 PLPP4Q5VZY2 271 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 TXNRD3NBQ6F5E7 133 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 GET4Q7L5D6 327 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 SPATA19Q7Z5L4 167 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 SYCP3Q8IZU3 236 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 TMEM99Q8N816 258 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF781Q8N8C0 355 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 CLEC1AQ8NC01 280 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 UBLCP1Q8WVY7 318 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 SMPDL3AQ92484 453 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 INPP5KQ9BT40 448 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 UTP14AQ9BVJ6 771 aaKnown RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 VIPAS39Q9H9C1 493 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 IL1RAPL2Q9NP60 686 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 CWC25Q9NXE8 425 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 DHRS4-AS1Q9P1J3 65 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 ARMCX1Q9P291 453 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 LEF1Q9UJU2 399 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 NOCTQ9UK39 431 aaKnown RBP2.82□□□□□ -1.96
SCFD1-210ENST00000553693 ITGA11Q9UKX5 1188 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 PXDNLA1KZ92 1463 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 NFAT5O94916 1531 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 LY75O60449 1722 aa2.82□□□□□ -1.96
SCFD1-210ENST00000553693 TDRD6O60522 2096 aaKnown RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 A0A0B4J203 849 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 GTPBP10A4D1E9 387 aaKnown RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 OOEPA6NGQ2 149 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 ZNF487B1APH4 448 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 HDAC3O15379 428 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 SCO2O43819 266 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 SRPX2O60687 465 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 FMO6PO60774 539 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 RHBDL1O75783 438 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 PNPP00491 289 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 KRT6AP02538 564 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 GBAP04062 536 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 KRT6BP04259 564 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 MMP10P09238 476 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 GIG44P09565 113 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 SKILP12757 684 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 PPP2R1AP30153 589 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 CHRNA3P32297 505 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 KRT6CP48668 564 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 IST1P53990 364 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 SNU13P55769 128 aaKnown RBP2.81□□□□□ -1.96
SCFD1-210ENST00000553693 STX1BP61266 288 aa2.81□□□□□ -1.96
SCFD1-210ENST00000553693 CETN1Q12798 172 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms