RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 RNH1P13489 461 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CSNK2A2P19784 350 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CSRP1P21291 193 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 AGXTP21549 392 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 IL12AP29459 219 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 NTSP30990 170 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 HNRNPH1P31943 449 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CCKBRP32239 447 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PGM1P36871 562 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 GABRA4P48169 554 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ALDH9A1P49189 494 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 NUDT2P50583 147 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ANXA11P50995 505 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 MANFP55145 182 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 HNRNPH2P55795 449 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 RAB38P57729 211 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 RAB8AP61006 207 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PPP1CAP62136 330 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 TXNL4AP83876 142 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CFHR1Q03591 330 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ZFP36L1Q07352 338 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 FOXM1Q08050 763 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 EIF3IQ13347 325 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 NFYCQ13952 458 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 RCAN2Q14206 197 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PTGR1Q14914 329 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 TRIP6Q15654 476 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 FAM174BQ3ZCQ3 159 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 DEFB134Q4QY38 66 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 STPG1Q5TH74 334 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 REP15Q6BDI9 236 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 BORAQ6PGQ7 559 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 BHLHB9Q6PI77 547 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CD300LDQ6UXZ3 194 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CEACAM20Q6UY09 585 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CAMKMTQ7Z624 323 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 GLRX5Q86SX6 157 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PPP1R3BQ86XI6 285 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 RIMKLAQ8IXN7 391 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF595Q8IYB9 648 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PGAM4Q8N0Y7 254 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 DPP10Q8N608 796 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 TNIP2Q8NFZ5 429 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 OR4K14Q8NGD5 310 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CLHC1Q8NHS4 586 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 OR5P2Q8WZ92 322 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 POP5Q969H6 163 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 GFM2Q969S9 779 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 SLC7A6OSQ96CW6 309 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF501Q96CX3 271 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 MMABQ96EY8 250 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ZBED6CLQ96FA7 236 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PRR11Q96HE9 360 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 EGLN2Q96KS0 407 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PPM1MQ96MI6 270 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 DEPDC7Q96QD5 511 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 BBS4Q96RK4 519 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ECSITQ9BQ95 431 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 NUDT22Q9BRQ3 303 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PELOQ9BRX2 385 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 EBPLQ9BY08 206 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 SPRTNQ9H040 489 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 RPF2Q9H7B2 306 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 C3orf14Q9HBI5 128 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF304Q9HCX3 659 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 FBXO8Q9NRD0 319 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CUTCQ9NTM9 273 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ACSS1Q9NUB1 689 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF282Q9UDV7 671 aaPredicted RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 NDOR1Q9UHB4 597 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 BTNL2Q9UIR0 455 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PRPF19Q9UMS4 504 aaKnown RBP4.72□□□□□ -1.65
VTI1B-202ENST00000553619 DAPP1Q9UN19 280 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 CORO2BQ9UQ03 480 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ENTPD4Q9Y227 616 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 BTBD3Q9Y2F9 522 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 NAALAD2Q9Y3Q0 740 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 ASB4Q9Y574 426 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PCDHA9Q9Y5H5 950 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 PCNX2A6NKB5 2137 aa4.72□□□□□ -1.65
VTI1B-202ENST00000553619 NUP214P35658 2090 aaPredicted RBP4.71□□□□□ -1.65
VTI1B-202ENST00000553619 LAMA2P24043 3122 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 C5orf42Q9H799 3197 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ASCC3Q8N3C0 2202 aaKnown RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 A0A096LPI6 279 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 A0A0G2JN53 185 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 EFCAB7A8K855 629 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 B4E171 279 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 D6RAR5 112 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 RFXANKO14593 260 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 POLR1CO15160 346 aaPredicted RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 PDPK1O15530 556 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 ZNF749O43361 778 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CHST10O43529 356 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 PRAMEF10O60809 474 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CTNSO60931 367 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 CBFA2T3O75081 653 aa4.71□□□□□ -1.66
VTI1B-202ENST00000553619 BCAS2O75934 225 aaPredicted RBP4.71□□□□□ -1.66
VTI1B-202ENST00000553619 KLHL18O94889 574 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms