RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 SSTR4P31391 388 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 VSNL1P62760 191 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 RPP38P78345 283 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 HSF1Q00613 529 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 IFFO1Q0D2I5 559 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 PRICKLE4Q2TBC4 344 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 LIPMQ5VYY2 423 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 WDR93Q6P2C0 686 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 DOLPP1Q86YN1 238 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 VWA5B2Q8N398 1253 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 FAM109AQ8N4B1 249 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 ZNF441Q8N8Z8 693 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 FAM13CQ8NE31 585 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 OR52N2Q8NGI0 321 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 FAM76AQ8TAV0 307 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 ERP27Q96DN0 273 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 C11orf24Q96F05 449 aaPredicted RBP12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 SECISBP2Q96T21 854 aaKnown RBP12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 TRMOQ9BU70 441 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 RUBCNLQ9H714 662 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 GIMAP4Q9NUV9 329 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 MKS1Q9NXB0 559 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 EHD3Q9NZN3 535 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 UTS2RQ9UKP6 389 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 ENTPD4Q9Y227 616 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 DLGAP4Q9Y2H0 992 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 TIMM22Q9Y584 194 aa12.13□□□□□ -0.47
HNRNPC-205ENST00000553300 PINLYPA6NC86 204 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 OR14I1A6ND48 311 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 UBFD1O14562 309 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 IGHG3P01860 377 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 CT62P0C5K7 136 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 UROSP10746 265 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 NAGAP17050 411 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 S1PR1P21453 382 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 TIA1P31483 386 aaKnown RBP eCLIP12.12□□□□□ -0.474e-7■■■■□ 24.7
HNRNPC-205ENST00000553300 FEN1P39748 380 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 DCTP40126 519 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 NR0B1P51843 470 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 DCAF7P61962 342 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 KCNJ2P63252 427 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 HMGCS1Q01581 520 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 FOXO1Q12778 655 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 SLC10A1Q14973 349 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 RPS6KA2Q15349 733 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 IMPG1Q17R60 797 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 TRIM46Q7Z4K8 759 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 C4orf33Q8N1A6 199 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 LRRC25Q8N386 305 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 DOK4Q8TEW6 326 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 ADIPOR1Q96A54 375 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 CTHRC1Q96CG8 243 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 APIPQ96GX9 242 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 KCNA7Q96RP8 456 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 BRINP2Q9C0B6 783 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 DEFB127Q9H1M4 99 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 ZFP64Q9NPA5 681 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 CHST11Q9NPF2 352 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 RRAGDQ9NQL2 400 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 MAT2BQ9NZL9 334 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 PRODH2Q9UF12 536 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 ZNF639Q9UID6 485 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 BOKQ9UMX3 212 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 NPFFR2Q9Y5X5 522 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 CHCHD2Q9Y6H1 151 aaPredicted RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 CACNA1DQ01668 2161 aa12.12□□□□□ -0.47
HNRNPC-205ENST00000553300 NCOA6Q14686 2063 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 TEX15Q9BXT5 2789 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 A0A1W2PS29 197 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 FAM166BA8MTA8 275 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 FOXO6A8MYZ6 492 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 PRSS44E7EML9 344 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 ACOX3O15254 700 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 SUSD5O60279 629 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 TRIM13O60858 407 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 TPOP07202 933 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 IL3P08700 152 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 ANXA4P09525 319 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 CHN1P15882 459 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 COL8A1P27658 744 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 MPIP34949 423 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 PIGAP37287 484 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 DNASE1L1P49184 302 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 HTR6P50406 440 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 PSPHP78330 225 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 RAE1P78406 368 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 ZNF763Q0D2J5 394 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 MGAT2Q10469 447 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 HIST2H2BCQ6DN03 193 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 TMEM211Q6ICI0 200 aa12.11□□□□□ -0.47
HNRNPC-205ENST00000553300 FGD2Q7Z6J4 655 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms