RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IGLV7-46A0A075B6I9 117 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 IGHV3-20A0A0C4DH32 117 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 MEX3AA1L020 520 aaKnown RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 G3V2L1 256 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 DUS4LO95620 317 aaKnown RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 AREGP15514 252 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 FCARP24071 287 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 PDHA2P29803 388 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 SLC12A3P55017 1021 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 FAM189A2Q15884 450 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 EPC2Q52LR7 807 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 GFI1BQ5VTD9 330 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 C17orf64Q86WR6 236 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 OR4A16Q8NH70 328 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 NR4A3Q92570 626 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 GLYATL1Q969I3 302 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 POM121L2Q96KW2 1035 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 SPATA13Q96N96 652 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 TMEM237Q96Q45 408 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 RUFY1Q96T51 708 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 OPRPNQ99935 248 aaPredicted RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 AGPAT1Q99943 283 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 PINK1Q9BXM7 581 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 FGFBP2Q9BYJ0 223 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 GANQ9H2C0 597 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 TNMDQ9H2S6 317 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 DPEP3Q9H4B8 488 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 GPN1Q9HCN4 374 aaPredicted RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 DDX28Q9NUL7 540 aaKnown RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 ACOXLQ9NUZ1 547 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 NLGN3Q9NZ94 848 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 RPH3AQ9Y2J0 694 aaPredicted RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 MRPS2Q9Y399 296 aaKnown RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 STRAPQ9Y3F4 350 aaKnown RBP4.11□□□□□ -1.75
LIMA1-205ENST00000550592 FLT4P35916 1363 aa4.11□□□□□ -1.75
LIMA1-205ENST00000550592 TJP1Q07157 1748 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 A0A0U1RQG5 324 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 A8MU76 341 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 KPNA7A9QM74 516 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 OGTO15294 1046 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 KRT86O43790 486 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 SEC22BO75396 215 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 GMNNO75496 209 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 TXNDC12O95881 172 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 SFTPBP07988 381 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 SERPINF2P08697 491 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 SELEP16581 610 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF18P17022 549 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 GLRA1P23415 457 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 AHCYP23526 432 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 NSFP46459 744 aaKnown RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 FHITP49789 147 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 TMEM50BP56557 158 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 KCNK10P57789 538 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 GALK2Q01415 458 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 HYAL1Q12794 435 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 RIGQ13278 110 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF177Q13360 481 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 KRT81Q14533 505 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 HEPACAMQ14CZ8 416 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 OR1C1Q15619 314 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 MOGAT2Q3SYC2 334 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 RFTN2Q52LD8 501 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF530Q6P9A1 599 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 TRIM65Q6PJ69 517 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 LCLAT1Q6UWP7 414 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 DLEU7Q6UYE1 221 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 Q71RC1 249 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 BHLHA9Q7RTU4 235 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 OR4N5Q8IXE1 308 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ZNF619Q8N2I2 560 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 CCDC197Q8NCU1 140 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 NEK11Q8NG66 645 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 OR4L1Q8NH43 312 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 EXOC6Q8TAG9 804 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 C11orf45Q8TAV5 145 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 KIAA1524Q8TCG1 905 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ATP8B4Q8TF62 1192 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 GTF3AQ92664 365 aaKnown RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 DEFB118Q96PH6 123 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 TRPV6Q9H1D0 765 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 CARD9Q9H257 536 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 C11orf49Q9H6J7 331 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 DCLRE1BQ9H816 532 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 FAM212BQ9NTI7 297 aaPredicted RBP4.1□□□□□ -1.75
LIMA1-205ENST00000550592 MED17Q9NVC6 651 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 NDE1Q9NXR1 346 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 BAIAP2L1Q9UHR4 511 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ATP6V0A2Q9Y487 856 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 ALPK3Q96L96 1907 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 EPG5Q9HCE0 2579 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 NCAPD2Q15021 1401 aa4.1□□□□□ -1.75
LIMA1-205ENST00000550592 FASNP49327 2511 aaKnown RBP4.09□□□□□ -1.75
LIMA1-205ENST00000550592 MACROD2A1Z1Q3 448 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 SHISA7A6NL88 538 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 TRAFD1O14545 582 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-205ENST00000550592 INPP4BO15327 924 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 ARHGEF9O43307 516 aa4.09□□□□□ -1.75
LIMA1-205ENST00000550592 CSDE1O75534 798 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms