RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CNPPD1Q9BV87 410 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-206ENST00000550406 SAR1AQ9NR31 198 aa12.13□□□□□ -0.47
RAB5C-206ENST00000550406 A0A1W2PRB8 838 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 FAM234BA2RU67 622 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 K7EM74 188 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 PLOD2O00469 737 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 C6orf47O95873 294 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 ITGB2P05107 769 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 PGRP06401 933 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 S100A3P33764 101 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 KIR3DL1P43629 444 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 CLCN2P51788 898 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 POLR2JP52435 117 aaKnown RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 MANFP55145 182 aaKnown RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 HSPB3Q12988 150 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 RAPSNQ13702 412 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 AGKQ53H12 422 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 B3GNTL1Q67FW5 361 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 TMEM107Q6UX40 140 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 C9orf40Q8IXQ3 194 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 VWA5B2Q8N398 1253 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 CLEC1AQ8NC01 280 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 GLB1L3Q8NCI6 653 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 PSMA8Q8TAA3 256 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 OR5P2Q8WZ92 322 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 ELP4Q96EB1 424 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 ZBED6CLQ96FA7 236 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 LHPPQ9H008 270 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 OR10A5Q9H207 317 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 CXorf36Q9H7Y0 433 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 LIN28AQ9H9Z2 209 aaKnown RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 ZBTB20Q9HC78 741 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-206ENST00000550406 ATAD3AQ9NVI7 634 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 DTX4Q9Y2E6 619 aa12.12□□□□□ -0.47
RAB5C-206ENST00000550406 A0A087WV62 115 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 TRBV11-1A0A0K0K1C0 115 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 PRSS51A0A1B0GVH4 220 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 ASPDHA6ND91 283 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 UPK1AO00322 258 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 RNASET2O00584 256 aaKnown RBP12.11□□□□□ -0.47
RAB5C-206ENST00000550406 PLOD3O60568 738 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 C1QCP02747 245 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 CAPN3P20807 821 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 ITGA3P26006 1051 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 SOX11P35716 441 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 MC3RP41968 323 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 EMDP50402 254 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 ST13P50502 369 aaKnown RBP12.11□□□□□ -0.47
RAB5C-206ENST00000550406 STX1BP61266 288 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 HBA1P69905 142 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 RNF4P78317 190 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 IRX1P78414 480 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-206ENST00000550406 UBAP2LQ14157 1087 aaKnown RBP12.11□□□□□ -0.47
RAB5C-206ENST00000550406 MYBPC3Q14896 1274 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 DPY19L1Q2PZI1 675 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 FCRLBQ6BAA4 426 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-206ENST00000550406 PCSK4Q6UW60 755 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 C16orf47Q6ZP98 133 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-206ENST00000550406 GK5Q6ZS86 529 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 ANKRD46Q86W74 232 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 ARMC10Q8N2F6 343 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 NATD1Q8N6N6 113 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 SIRT6Q8N6T7 355 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 OR7G1Q8NGA0 311 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 C16orf52Q8NHV5 167 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 VPS33AQ96AX1 596 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 OR52E6Q96RD3 313 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 ZBTB18Q99592 522 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 INPP5KQ9BT40 448 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 NMUR2Q9GZQ4 415 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 SERHLQ9NQF3 203 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 CCDC167Q9P0B6 97 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 NTMQ9P121 344 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 BTNL2Q9UIR0 455 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 C19orf53Q9UNZ5 99 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-206ENST00000550406 TRIM33Q9UPN9 1127 aa12.11□□□□□ -0.47
RAB5C-206ENST00000550406 PKD1L2Q7Z442 2459 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 A8MUI8 341 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 FCHO1O14526 889 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 ZNF354AO60765 605 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-206ENST00000550406 PSMG1O95456 288 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 PDGFAP04085 211 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 IL6P05231 212 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 IFI6P09912 130 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 DDX5P17844 614 aaKnown RBP12.1□□□□□ -0.47
RAB5C-206ENST00000550406 CDKN2CP42773 168 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 POLE2P56282 527 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 KLF10Q13118 480 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 RCAN2Q14206 197 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 TLR1Q15399 786 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 ANXA8L1Q5VT79 327 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 TCTN3Q6NUS6 607 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 HSDL2Q6YN16 418 aa12.1□□□□□ -0.47
RAB5C-206ENST00000550406 RNF111Q6ZNA4 994 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms