RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ADGRD1Q6QNK2 874 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 NCCRP1Q6ZVX7 275 aaPredicted RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 COMMD6Q7Z4G1 85 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 GBP7Q8N8V2 638 aaPredicted RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF441Q8N8Z8 693 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 NOA1Q8NC60 698 aaKnown RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 OR10G3Q8NGC4 313 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 ACMSDQ8TDX5 336 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF483Q8TF39 744 aaPredicted RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 SREK1Q8WXA9 508 aaKnown RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 DIO2Q92813 273 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 LRRC46Q96FV0 321 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 MRPL1Q9BYD6 325 aaKnown RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF703Q9H7S9 590 aaPredicted RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 MCCC2Q9HCC0 563 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZBTB26Q9HCK0 441 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 PNPLA3Q9NST1 481 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 VPS29Q9UBQ0 182 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 FETUBQ9UGM5 382 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 SLC12A4Q9UP95 1085 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF780BQ9Y6R6 833 aa10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 NCOA6Q14686 2063 aaPredicted RBP10.01□□□□□ -0.81
VTI1BP3-201ENST00000550220 WASHC1A8K0Z3 465 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 A8MT66 165 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 H3BQF6 201 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ACOX3O15254 700 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 TRIM3O75382 744 aaPredicted RBP10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ULK1O75385 1050 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 TOXO94900 526 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 PDYNP01213 254 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 GBAP04062 536 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 GLI4P10075 376 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 IMPDH1P20839 514 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ATP5F1P24539 256 aaPredicted RBP10□□□□□ -0.81
VTI1BP3-201ENST00000550220 MSX1P28360 303 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ECHS1P30084 290 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 SSTR4P31391 388 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 GCKP35557 465 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 HSD17B3P37058 310 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 GSTM5P46439 218 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 NUP107P57740 925 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 TLE4Q04727 773 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 CLCQ05315 142 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 TEX35Q5T0J7 233 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 C1orf185Q5T7R7 199 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 PRAMEF20Q5VT98 475 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 CES4AQ5XG92 561 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 PM20D2Q8IYS1 436 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 VWA5B2Q8N398 1253 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 TMEM151AQ8N4L1 468 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF615Q8N8J6 731 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 OR5M9Q8NGP3 310 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 NEIL3Q8TAT5 605 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 SPPL2AQ8TCT8 520 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ADIPOR1Q96A54 375 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ERP27Q96DN0 273 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 HSPBAP1Q96EW2 488 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF597Q96LX8 424 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 JSRP1Q96MG2 331 aaPredicted RBP10□□□□□ -0.81
VTI1BP3-201ENST00000550220 NSUN5Q96P11 429 aaKnown RBP10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ANGPTL4Q9BY76 406 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 SHCBP1LQ9BZQ2 653 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 TEX10Q9NXF1 929 aaPredicted RBP10□□□□□ -0.81
VTI1BP3-201ENST00000550220 ALKBH4Q9NXW9 302 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 PRODH2Q9UF12 536 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 KCNN3Q9UGI6 736 aa10□□□□□ -0.81
VTI1BP3-201ENST00000550220 CNOT11Q9UKZ1 510 aaKnown RBP10□□□□□ -0.81
VTI1BP3-201ENST00000550220 FAM90A27PA6NNH2 459 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 HSPB2A8KAH6 182 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 TRAPPC6AO75865 159 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 SUPT7LO94864 414 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 CLPSP04118 112 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 GSTA1P08263 222 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 CELA3AP09093 270 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 RFPL3SP0C7P2 107 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 DRD2P14416 443 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 IGFBP2P18065 325 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 MASP1P48740 699 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 PRKAA2P54646 552 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 CDH13P55290 713 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 TFF3Q07654 80 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 GALNT1Q10472 559 aaPredicted RBP9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 CSTF3Q12996 717 aaKnown RBP9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 SNTA1Q13424 505 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 HEPACAMQ14CZ8 416 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 HSPB2Q16082 182 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 RIPPLY2Q5TAB7 128 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 LETMD1Q6P1Q0 360 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 TMEM81Q6P7N7 255 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 GPRIN3Q6ZVF9 776 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 NUP54Q7Z3B4 507 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 HOMEZQ8IX15 550 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 DMRTC2Q8IXT2 367 aaPredicted RBP9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 METTL6Q8TCB7 284 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 TM4SF18Q96CE8 201 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 CCDC126Q96EE4 140 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 ZNF382Q96SR6 550 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 PROK2Q9HC23 129 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 GIMAP4Q9NUV9 329 aa9.99□□□□□ -0.81
VTI1BP3-201ENST00000550220 DCDC2Q9UHG0 476 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms