RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 RPL3P39023 403 aaKnown RBP17.95■□□□□ 0.46
DDX54-207ENST00000550016 ST13P50502 369 aaKnown RBP17.95■□□□□ 0.46
DDX54-207ENST00000550016 HLCSP50747 726 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 SSR4P51571 173 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 OC90Q02509 493 aaPredicted RBP17.95■□□□□ 0.46
DDX54-207ENST00000550016 PDE7AQ13946 482 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 MPEG1Q2M385 716 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 C16orf47Q6ZP98 133 aaPredicted RBP17.95■□□□□ 0.46
DDX54-207ENST00000550016 LARP4Q71RC2 724 aaKnown RBP eCLIP17.95■□□□□ 0.461e-6■□□□□ 11.1
DDX54-207ENST00000550016 ZNF605Q86T29 641 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 FAM9CQ8IZT9 166 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 HORMAD2Q8N7B1 307 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 PPCDCQ96CD2 204 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 ERP27Q96DN0 273 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 MAGEB18Q96M61 343 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 TRIM45Q9H8W5 580 aaPredicted RBP17.95■□□□□ 0.46
DDX54-207ENST00000550016 MED4Q9NPJ6 270 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 ANKRD10Q9NXR5 420 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 SH3BP4Q9P0V3 963 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 LUZP4Q9P127 313 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 EXPH5Q8NEV8 1989 aa17.95■□□□□ 0.46
DDX54-207ENST00000550016 TTLL8A6PVC2 850 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 PRAMEF2O60811 474 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 G6PDP11413 515 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 PCSK2P16519 638 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 SOX18P35713 384 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 CYB561P49447 251 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 NCBP2P52298 156 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDX54-207ENST00000550016 PTGR1Q14914 329 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 OR1C1Q15619 314 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 TRMT12Q53H54 448 aaKnown RBP17.94■□□□□ 0.46
DDX54-207ENST00000550016 ZNF628Q5EBL2 1059 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 PIGGQ5H8A4 983 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 ZNF468Q5VIY5 522 aaPredicted RBP17.94■□□□□ 0.46
DDX54-207ENST00000550016 ANKRD26P1Q6NSI1 321 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 TMEM156Q8N614 296 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 MDS2Q8NDY4 140 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 OR9A2Q8NGT5 310 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 KAT2AQ92830 837 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 AMDHD1Q96NU7 426 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 SIGLEC12Q96PQ1 595 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 RASL10BQ96S79 203 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 WWTR1Q9GZV5 400 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 SLCO1B3Q9NPD5 702 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 LRFN1Q9P244 771 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 BCAP29Q9UHQ4 241 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 ATP6V1HQ9UI12 483 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 PCDHGA10Q9Y5H3 936 aa17.94■□□□□ 0.46
DDX54-207ENST00000550016 SMG1Q96Q15 3661 aaKnown RBP17.94■□□□□ 0.46
DDX54-207ENST00000550016 PRRC2CQ9Y520 2896 aaKnown RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 C2orf92A0A1B0GVN3 265 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 SCAMP2O15127 329 aaKnown RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 PDPK1O15530 556 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 SLC28A2O43868 658 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 BCAS2O75934 225 aaPredicted RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 CBX7O95931 251 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 PRPS1L1P21108 318 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 CLDN8P56748 225 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 EXOSC7Q15024 291 aaKnown RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 EBPQ15125 230 aaKnown RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 ZNF385BQ569K4 471 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 SPINK14Q6IE38 97 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 OGFOD2Q6N063 350 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 RPUSD3Q6P087 351 aaKnown RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 SPATA19Q7Z5L4 167 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 GPALPP1Q8IXQ4 340 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 SLC15A4Q8N697 577 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 ASB15Q8WXK1 588 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 GAL3ST4Q96RP7 486 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 EPN3Q9H201 632 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 GLIPR2Q9H4G4 154 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 WDR55Q9H6Y2 383 aaPredicted RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 RYDENQ9NUL5 291 aaKnown RBP17.93■□□□□ 0.46
DDX54-207ENST00000550016 MAPRE3Q9UPY8 281 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 CFL2Q9Y281 166 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 PCDHGB6Q9Y5F9 930 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 SHANK1Q9Y566 2161 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 ZNF462Q96JM2 2506 aa17.93■□□□□ 0.46
DDX54-207ENST00000550016 ZNF195O14628 629 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 PLOD3O60568 738 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 NEURL1O76050 574 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 SLITRK5O94991 958 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 CD46P15529 392 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 EPHA3P29320 983 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 DIO3P55073 304 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 C21orf58P58505 322 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 MRPS35P82673 323 aaKnown RBP17.92■□□□□ 0.46
DDX54-207ENST00000550016 ZNF766Q5HY98 468 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 HLA-DQA1Q5Y7H0 255 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 OPN5Q6U736 354 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 RGS9BPQ6ZS82 235 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 RIMKLAQ8IXN7 391 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 ARFGAP2Q8N6H7 521 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 OR7A2PQ8NGA2 310 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 C16orf52Q8NHV5 167 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 SLC22A8Q8TCC7 542 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 TP53INP1Q96A56 240 aa17.92■□□□□ 0.46
DDX54-207ENST00000550016 CIDECQ96AQ7 238 aaPredicted RBP17.92■□□□□ 0.46
DDX54-207ENST00000550016 PRPF18Q99633 342 aaKnown RBP17.92■□□□□ 0.46
DDX54-207ENST00000550016 USH1CQ9Y6N9 552 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms