RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 VILLO15195 856 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 CSF2P04141 144 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 RCVRNP35243 200 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 PIGAP37287 484 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 ZNF852Q6ZMS4 543 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 OAFQ86UD1 273 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 OR51L1Q8NGJ5 315 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 C17orf50Q8WW18 174 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 DKK3Q9UBP4 350 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 A0A075B6Q4 140 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 SSNA1O43805 119 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 PRKAR1AP10644 381 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 GADD45AP24522 165 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 SCN1BQ07699 218 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 VEZF1Q14119 521 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 SMU1Q2TAY7 513 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 ZNF750Q32MQ0 723 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 CYHR1Q6ZMK1 362 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 Q6ZNB5 142 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 KLHL36Q8N4N3 616 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 MBNL1Q9NR56 388 aaKnown RBP14.23□□□□□ -0.13
CUX1-214ENST00000550008 ABCD2Q9UBJ2 740 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 BCAS1O75363 584 aaPredicted RBP14.23□□□□□ -0.13
CUX1-214ENST00000550008 ABATP80404 500 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 RPL6Q02878 288 aaKnown RBP14.23□□□□□ -0.13
CUX1-214ENST00000550008 CSTF1Q05048 431 aaKnown RBP14.23□□□□□ -0.13
CUX1-214ENST00000550008 LCTLQ6UWM7 567 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 SNX29P2Q8IUI4 249 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 SLC25A37Q9NYZ2 338 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 GPR34Q9UPC5 381 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 CEPT1Q9Y6K0 416 aa14.23□□□□□ -0.13
CUX1-214ENST00000550008 FER1L6Q2WGJ9 1857 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 SAGE2PA6NJ88 616 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 H0YIV9 168 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 SLCO2B1O94956 709 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 KCNK5O95279 499 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 DRD2P14416 443 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 HNRNPA2B1P22626 353 aaKnown RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 S100A1P23297 94 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 PCGF2P35227 344 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 MASP1P48740 699 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 POU6F2P78424 691 aaPredicted RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 B4GALNT1Q00973 533 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 ARHGAP40Q5TG30 622 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 RAB43Q86YS6 212 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 NRMQ8IXM6 262 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 BBS10Q8TAM1 723 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 CRELD1Q96HD1 420 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 SECISBP2Q96T21 854 aaKnown RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 TMEM168Q9H0V1 697 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 FAAHO00519 579 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 GSTM2P28161 218 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 IGFALSP35858 605 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 PRDX1Q06830 199 aaKnown RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 MSANTD1Q6ZTZ1 278 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 CBLL1Q75N03 491 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 SLC15A4Q8N697 577 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 SUN3Q8TAQ9 357 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 RPL3LQ92901 407 aaKnown RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 HHIPQ96QV1 700 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 TMEM184CQ9NVA4 438 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 AKAP7Q9P0M2 348 aaPredicted RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 PCDHGA4Q9Y5G9 962 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 TET1Q8NFU7 2136 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 H0Y8X5 98 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 CCRL2O00421 344 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 KHDRBS3O75525 346 aaKnown RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 ARHGEF15O94989 841 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 CTSLP07711 333 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 GKN3PP0CG01 181 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 BMP1P13497 986 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 SPHARQ15513 63 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 PARM1Q6UWI2 310 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 METTL25Q8N6Q8 603 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 PSD4Q8NDX1 1056 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 TSEN15Q8WW01 171 aaKnown RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 GATAD2BQ8WXI9 593 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 PIGKQ92643 395 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 TMEM138Q9NPI0 162 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 PRTFDC1Q9NRG1 225 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 LYARQ9NX58 379 aaKnown RBP14.22□□□□□ -0.13
CUX1-214ENST00000550008 KCMF1Q9P0J7 381 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 NEU3Q9UQ49 428 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 RP1P56715 2156 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 TMEM35AQ53FP2 167 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 VN1R2Q8NFZ6 395 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 OR8J1Q8NGP2 316 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 PRR14Q9BWN1 585 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 MND1Q9BWT6 205 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 CDADC1Q9BWV3 514 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 ZSCAN32Q9NX65 697 aa14.22□□□□□ -0.13
CUX1-214ENST00000550008 GRXCR2A6NFK2 248 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 UBXN7O94888 489 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 AGR2O95994 175 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 PORP16435 677 aaPredicted RBP14.21□□□□□ -0.13
CUX1-214ENST00000550008 CRHBPP24387 322 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 NAA10P41227 235 aaPredicted RBP14.21□□□□□ -0.13
CUX1-214ENST00000550008 PPP2R2BQ00005 443 aa14.21□□□□□ -0.13
CUX1-214ENST00000550008 HNRNPA0Q13151 305 aaKnown RBP14.21□□□□□ -0.13
CUX1-214ENST00000550008 SHHQ15465 462 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms