RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RNF14Q9UBS8 474 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 CAMK2AQ9UQM7 478 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 C15orf41Q9Y2V0 281 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 ASB4Q9Y574 426 aa12.43□□□□□ -0.42
TROAP-211ENST00000549891 KIAA1549Q9HCM3 1950 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 A0A1W2PR48 441 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 EEF1E1-BLOC1S5C9J1V9 151 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 EEF1E1O43324 174 aaKnown RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 ACSL3O95573 720 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 IL18BPO95998 194 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 SSTR4P31391 388 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 BSGP35613 385 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 WNT3P56703 355 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 POMZP3Q6PJE2 187 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 BIVMQ86UB2 503 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 GALNT12Q8IXK2 581 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 MMP21Q8N119 569 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 C17orf47Q8NEP4 570 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 ABTB1Q969K4 478 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 TMEM41AQ96HV5 264 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 GNRHR2Q96P88 292 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 NAPGQ99747 312 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 YIPF4Q9BSR8 244 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 ZNF717Q9BY31 904 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 EPB41L4BQ9H329 900 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 CXorf21Q9HAI6 301 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 RPH3AQ9Y2J0 694 aaPredicted RBP12.42□□□□□ -0.42
TROAP-211ENST00000549891 ACOT9Q9Y305 439 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 SLC6A5Q9Y345 797 aa12.42□□□□□ -0.42
TROAP-211ENST00000549891 ABCA2Q9BZC7 2435 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 FOXE1O00358 373 aaPredicted RBP12.41□□□□□ -0.42
TROAP-211ENST00000549891 TMPRSS11DO60235 418 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 EEDO75530 441 aaKnown RBP12.41□□□□□ -0.42
TROAP-211ENST00000549891 ATE1O95260 518 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 AIFM1O95831 613 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 ACTL6AO96019 429 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 CLPSP04118 112 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 GFAPP14136 432 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 BMP7P18075 431 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 CASP3P42574 277 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 ALDH18A1P54886 795 aaKnown RBP12.41□□□□□ -0.42
TROAP-211ENST00000549891 GNG11P61952 73 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 FUT7Q11130 342 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 DLG1Q12959 904 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 NAB1Q13506 487 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 CPSF6Q16630 551 aaKnown RBP eCLIP12.41□□□□□ -0.42
TROAP-211ENST00000549891 FAM83EQ2M2I3 478 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 KBTBD12Q3ZCT8 623 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 BICRALQ6AI39 1079 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 METTL2BQ6P1Q9 378 aaKnown RBP12.41□□□□□ -0.42
TROAP-211ENST00000549891 TMEM64Q6YI46 380 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 CMC1Q7Z7K0 106 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 PPM1NQ8N819 430 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 OR7G1Q8NGA0 311 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 OR4K14Q8NGD5 310 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 OR1J4Q8NGS1 313 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 WDYHV1Q96HA8 205 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 ZFP3Q96NJ6 502 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 ERP44Q9BS26 406 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 UGT2B28Q9BY64 529 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 OR10A5Q9H207 317 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 GSX1Q9H4S2 264 aaPredicted RBP12.41□□□□□ -0.42
TROAP-211ENST00000549891 METTL7AQ9H8H3 244 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 NEUROD4Q9HD90 331 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 FETUBQ9UGM5 382 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 CFL2Q9Y281 166 aa12.41□□□□□ -0.42
TROAP-211ENST00000549891 TNPO3Q9Y5L0 923 aaKnown RBP12.41□□□□□ -0.42
TROAP-211ENST00000549891 A0A087X1B8 175 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 WASHC1A8K0Z3 465 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 CLCA1A8K7I4 914 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 KDM4EB2RXH2 506 aaPredicted RBP12.4□□□□□ -0.42
TROAP-211ENST00000549891 ERN1O75460 977 aaKnown RBP12.4□□□□□ -0.42
TROAP-211ENST00000549891 SEMA3DO95025 777 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 TMIGD3P0DMS9 266 aaPredicted RBP12.4□□□□□ -0.42
TROAP-211ENST00000549891 CYP4B1P13584 511 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 MTHFD2P13995 350 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 NAGAP17050 411 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 STX2P32856 288 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 PFKFB4Q16877 469 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 WIPI1Q5MNZ9 446 aaPredicted RBP12.4□□□□□ -0.42
TROAP-211ENST00000549891 FNDC7Q5VTL7 733 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 TIGD3Q6B0B8 471 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 KLC3Q6P597 504 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 SCIMPQ6UWF3 145 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 ZNF615Q8N8J6 731 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 LINC01560Q8TB33 94 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 WDR20Q8TBZ3 569 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 ZPLD1Q8TCW7 415 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 ADIPOR1Q96A54 375 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 NXNL1Q96CM4 212 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 DTNBP1Q96EV8 351 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
TROAP-211ENST00000549891 DPH5Q9H2P9 285 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms