RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 RUBCNLQ9H714 662 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 POLR1BQ9H9Y6 1135 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 WNT16Q9UBV4 365 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 PSORS1C1Q9UIG5 152 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 PCDHGA10Q9Y5H3 936 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 GMPPBQ9Y5P6 360 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 SNX11Q9Y5W9 270 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 DUXAA6NLW8 204 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 METTL12A8MUP2 240 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 H3BMQ9 156 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 P2RX6O15547 441 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 TP53P04637 393 aaPredicted RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 NME1P15531 152 aaKnown RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 NELFEP18615 380 aaKnown RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 CHMP24386 653 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 SOAT1P35610 550 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 LSSP48449 732 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 ARHGAP11BQ3KRB8 267 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 PLD3Q8IV08 490 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 DNAJC22Q8N4W6 341 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF655Q8N720 491 aaPredicted RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 OR10Q1Q8NGQ4 319 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 TRUB1Q8WWH5 349 aaKnown RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 TANKQ92844 425 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 COG8Q96MW5 612 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 MS4A4EQ96PG1 132 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 NODALQ96S42 347 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 NELL2Q99435 816 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 STACQ99469 402 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 GIMAP4Q9NUV9 329 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 CNOT2Q9NZN8 540 aaKnown RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 C19orf53Q9UNZ5 99 aaPredicted RBP9.39□□□□□ -0.91
RAB5B-206ENST00000549505 ENTPD4Q9Y227 616 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 CA5BQ9Y2D0 317 aa9.39□□□□□ -0.91
RAB5B-206ENST00000549505 FITM1A5D6W6 292 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 PCDHGA12O60330 932 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 GALR3O60755 368 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ANGPTL1O95841 491 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 BCHEP06276 602 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 THBS1P07996 1170 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 CHRM4P08173 479 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF888P0CJ79 500 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ELAVL4P26378 380 aaKnown RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 BUD31P41223 144 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 EPHA4P54764 986 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MGAT2Q10469 447 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 RUNX2Q13950 521 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 NR1D2Q14995 579 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ENTPD8Q5MY95 495 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 C18orf63Q68DL7 685 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 LRRC25Q8N386 305 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SPPL2AQ8TCT8 520 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 TMEM121BQ9BXQ6 578 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SLC38A1Q9H2H9 487 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 EPHA6Q9UF33 1036 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 RNF6Q9Y252 685 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 DOCK9Q9BZ29 2069 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 HEATR5BQ9P2D3 2071 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MYO7AQ13402 2215 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 GABARAPO95166 117 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 GADD45GO95257 159 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 INHBBP09529 407 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 IMPDH2P12268 514 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 IL7RP16871 459 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 AGXTP21549 392 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 PCSK6P29122 969 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 PPP2R1BP30154 601 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 GCGRP47871 477 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 TFF2Q03403 129 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 HSPB3Q12988 150 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SLX4IPQ5VYV7 408 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MFSD12Q6NUT3 480 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 C19orf48Q6RUI8 117 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SLC16A12Q6ZSM3 486 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MORN4Q8NDC4 146 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 OR4D11Q8NGI4 311 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 C12orf43Q96C57 262 aaKnown RBP9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ERLEC1Q96DZ1 483 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 PRRC1Q96M27 445 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 OR7D2Q96RA2 312 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 BBS4Q96RK4 519 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SLC25A19Q9HC21 320 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 LTB4R2Q9NPC1 389 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MAN2C1Q9NTJ4 1040 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF226Q9NYT6 803 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ENPP5Q9UJA9 477 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF780BQ9Y6R6 833 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 U3KQV3 271 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 FANCMQ8IYD8 2048 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 SH3PXD2BA1X283 911 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 OR6C74A6NCV1 312 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 TMEM247A6NEH6 219 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 C5orf58C9J3I9 102 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 B3GALT2O43825 422 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 AK1P00568 194 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 VIPP01282 170 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 MSL3P1P0C860 447 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 HOXA6P31267 233 aa9.38□□□□□ -0.91
RAB5B-206ENST00000549505 GP2P55259 537 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms